Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00282 ATGGCTCCCAAGCAGCCTAATTCAGGCCTTTTTGTGGGATTGAATAAGGGTCACATAGTGACCAAGAAGGAGTTGCCTCCACGCCCTTCTGACCGCAAAGGAAAAACAAGCAAGAGGGTTCACTTTGTGAGGAATCTTATCAGGGAAGTTGCTGGTTTTGCCCCATATGAGAAAAGAATTACTGAGCTTCTGAAGGTAGGTAAGGACAAGCGTGCTTTGAAGGTTGCCAAGAGAAAGCTGGGTACTCACAAGAGGGCTAAGAGAAAGCGCGAGGAGATGTCTAATGTTCTCCGCAAGATGAGGTCTGGAGGTGGTGCAGAGAAAAAGAAGTGA 333 0.4745 MAPKQPNSGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRSGGGAEKKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00282 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pte16g00282 110 MobiDBLite consensus disorder prediction 79 110 - -
Pte16g00282 110 FunFam 60S ribosomal protein L36 1 106 - -
Pte16g00282 110 MobiDBLite consensus disorder prediction 1 38 - -
Pte16g00282 110 MobiDBLite consensus disorder prediction 87 110 - -
Pte16g00282 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Pte16g00282 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 107 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pte16g00282 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00282 Pte-Chr16 3772860 3774193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00282 1 111 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 81.416 2.83e-58 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00282 K02920 - qsa:O6P43_004287 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00282 16 3772860 3774193 Pte9g00346 9 4154695 4156554 RCT
Pte16g00282 16 3772860 3774193 Pte16g00282 16 3772860 3774193 RCT