Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00247 ATGGGCTTATTCCGGCGACTATTTGGGACCAAAAAACAACCGGTAAACTCGGATGCTCCGGGTTCCAAACTGCGCGCGCAGAAGAGGAGGTGGAGTTTTGTGAAGTCTACCAAGGAGAATTGTCAATTGACAACACCCTATTCCTCTCCTTTCAATGGGCTAGATAGTCCATCTACTTCTCCTGGTGTCTTCAGCGAGTCATTGGATGCTAACAAACATGCCATAGCGGTGGCGGCTGCCACTGCAGCGGTAGCTGAGGCGGCACTTGCTGCTGCACATGCGGCGGCGGAAGTGGTCAGGCTCACAAACGGAACCGGTGGTGCGAGAAGTACCTCCTCTGCGCACGGTATCAACAGTCAGAGGATATGTACGGAGGTAATCTCAGCTGTCAAGATACAGTCTGCATTCCGAGGATATTTGGCAAGAAGGGCATTGAGGGCTCTCAAAGCATTGGTGAAACTGCAAGCTTTAGTTAAAGGCCACATAGTGCGGAAACAAACTGCAGATATGTTCAGGAGGATGCAAACTTTGGTCAGATTGCAATCTCGCGTACGTGCACATCGAATGCACATGGCAGAAACTTCACATTCCAGCAAGTCTTCCTTTTCTCATTATCCTAATAATGATTTGGAGCATCCATACCAGGGCTATGGTAGCAAATACCCTTCTGTGCTGAAGAGGTGTACTTCAAATTCTAGCTTTAGGGAGATCGATAGTTCTCGAGTGCAGTTGGATAAGAACTGGTTAGACTGTTGGATGGAAGAAAACTTGTGGACAGACCGCCGTGATACTTCATTGAGAACTGGTCATGCGGACGATGAGAATGACAAAATTCTGGAAGTAGATACTTGGAAGCCACATCTGAACCCCCAACTGCAGAATAAACCTTCCCATTCATCACGTCATGGATTGGCTTCTGATTATAACTCTCCCACAAAATCTTCAAGGAAATTGATAAATCCAAGTGTATTTTCAAAAGAAGTTTCTACTCTAAGTCTTAATTATCCGAAAGGGAAAGAAGATGCAGCTTCATGGACTGGAGAGAATAGTCCTGCATTTTCTTTATCTTCTAGGGCTGGAGGTGTTGCAAGGAAGACGCCCTTCACGCCAACAAGAAGTGAGTTCTCATTGGGCTTCTTTAATGGCTATTCAGGGCATCCAAACTACATGGCAAACACAGAATCCTCTAGGGCCAAGTCTAGATCACTGAGTGCCCCCAGACAAAGACTTGAGTTTGAGAGGTATGGTTCTACGAGAATGTCTTTGCAGGGATCTTGGGAAGGTGGCATTAATTCGGACAAAACTCATCCAACCTCTAGTCGCTTTAACAGACCTGGAAGTACAAATTTAAGGTGA 1356 0.4617 MGLFRRLFGTKKQPVNSDAPGSKLRAQKRRWSFVKSTKENCQLTTPYSSPFNGLDSPSTSPGVFSESLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGTGGARSTSSAHGINSQRICTEVISAVKIQSAFRGYLARRALRALKALVKLQALVKGHIVRKQTADMFRRMQTLVRLQSRVRAHRMHMAETSHSSKSSFSHYPNNDLEHPYQGYGSKYPSVLKRCTSNSSFREIDSSRVQLDKNWLDCWMEENLWTDRRDTSLRTGHADDENDKILEVDTWKPHLNPQLQNKPSHSSRHGLASDYNSPTKSSRKLINPSVFSKEVSTLSLNYPKGKEDAASWTGENSPAFSLSSRAGGVARKTPFTPTRSEFSLGFFNGYSGHPNYMANTESSRAKSRSLSAPRQRLEFERYGSTRMSLQGSWEGGINSDKTHPTSSRFNRPGSTNLR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00247 451 MobiDBLite consensus disorder prediction 337 356 - -
Pte16g00247 451 Gene3D - 126 177 - -
Pte16g00247 451 MobiDBLite consensus disorder prediction 422 451 - -
Pte16g00247 451 MobiDBLite consensus disorder prediction 286 317 - -
Pte16g00247 451 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Pte16g00247 451 Pfam Protein of unknown function (DUF4005) 352 432 IPR025064 -
Pte16g00247 451 PANTHER IQ-DOMAIN 5-RELATED 26 431 - -
Pte16g00247 451 ProSiteProfiles IQ motif profile. 128 153 IPR000048 GO:0005515
Pte16g00247 451 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Pte16g00247 451 Pfam IQ calmodulin-binding motif 149 166 IPR000048 GO:0005515
Pte16g00247 451 SMART iq_5 147 168 IPR000048 GO:0005515
Pte16g00247 451 SMART iq_5 124 146 IPR000048 GO:0005515
Pte16g00247 451 MobiDBLite consensus disorder prediction 287 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00247 Pte-Chr16 3024303 3027731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00247 1 426 IQD Protein Family AT5G62070 45.103 2.74e-58 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00247 - - qsa:O6P43_008253 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00247 16 3024303 3027731 Pte16g00247 16 3024303 3027731 RCT