Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00205 ATGTTTCCATTAAACCAGGATGATGATAACATTAATTCATTTGAACAAATCCCCTTTACCCCAAATTTTCAAGAGCAAAACGTGATCAGTCAACAAGGCTTAAATATTCAGTCTCCTGAACAACAGGACCAAGTTAATGTTGCCAACCACTTGGGGATCAGTAGCCAACAACCTCAGATCTTAACTACTCGAGGCAATCATGGTGAAGCAAATAATGTCGGAATCAACGAGAGAAGGATCATCCGCAGGGATATAGAAAGACAAAGAAGGCTGCATATGACCTTCTTATTTGCATCTCTCCGAGCATTGCTCCCTGTTGAGTACATCCAGGGAAAACGTTCTGTGCCTGATCAAACGGATGGGGCCACAAACTACATCAAATATTTGAAGGAGAAGATTCTGCAATATGAAGTCGAGAGAGACAAGCTCAAATGCTTCATGAAGAATTCAAGCTTGCGAGGAGGCACTGGAAACCCGAGTAGTAACTTAATAAACAATGTTAGGGTAAGTCAAATTCCTGGTGTGGTGGAGATTGTTATCAGCAGCAGATCAAAGGAAAGCATAGTGCCCTTGTCTGAAGTACTCAAGATATTGCTTCAAGAAGGATATGATGTTGTTAGCTGTCACTCCGCTGAAGTAGATGATAGAGTGATTCACTCTATTAAATCTGAGGTATAA 678 0.41 MFPLNQDDDNINSFEQIPFTPNFQEQNVISQQGLNIQSPEQQDQVNVANHLGISSQQPQILTTRGNHGEANNVGINERRIIRRDIERQRRLHMTFLFASLRALLPVEYIQGKRSVPDQTDGATNYIKYLKEKILQYEVERDKLKCFMKNSSLRGGTGNPSSNLINNVRVSQIPGVVEIVISSRSKESIVPLSEVLKILLQEGYDVVSCHSAEVDDRVIHSIKSEV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00205 225 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 79 224 - -
Pte16g00205 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 129 IPR011598 GO:0046983
Pte16g00205 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 145 IPR036638 GO:0046983
Pte16g00205 225 Gene3D - 73 155 IPR036638 GO:0046983
Pte16g00205 225 Pfam Helix-loop-helix DNA-binding domain 78 130 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00205 Pte-Chr16 2392489 2393496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00205 63 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 38.690 6.83e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00205 - - csin:114289221 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00205 16 2392489 2393496 Pte16g00205 16 2392489 2393496 RCT