Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00194 ATGGAGGAGAAAGAGCAAGTGTTGAAGTGGAGTTCTATTATGGGGAAGAAAGTGGAGCATCTACTCTGTTCTGTCATTGGAGTTCTGCTGGTTTTGTCTCCTCTAGTTTCATCACTCAACGACGAAGCACAATCGTTGATGTCGATCAAGGCTTCTTTTAGCAACGTAGCTAACGTTTTGCTTGACTGGGACAATGTCCACGACGGCGATTTTTGTTCATGGCATGGAGTCTTTTGTGACAATGCGAGTTTCACCGTGCTTGGACTTGACCTTGCTCGGAACCAGCTTACAGGGGAGATACCGAGGCTACTGTATTGGAATGAAGTACTGCAATATTTAGGATTGCGGGGGAACTTGTTGACTGGAGTTCTATCCCCAGACATGTGTCAATTAACTGGGCTGTGGTACTTTGATGTTAGAGGCAATAATTTGACTGGAAAAATTCCGGAAAGCATAGGGAACTGTTCAAATTTTGAAATCCTGTACGTTTTAAGTCTCTCCTGTGCACTTGTCATATTCTTGCGATCATATTCTTACCTAACAATGCGGATTGGCAGGGACATATCCTATAATCAGATTACTGGCGAAATTCCCTACAACATTGGGTTCCTTCAAGTGGCTACTTTGTCTCTCCAAGGGAATAAGTTAACTGGAAAGATTCCTGAGGTTATTGGTTTAATGCAAGCCCTTGCTGTTCTGGATTTGAGTGAAAATCAACTTGTTGGACCTATACCTCCCATTCTTGGCAATTTAACTTATACTGGCAAGCTATATCTGCATGGTAACATGCTTACTGGTCCAATACCTCCAGAACTTGGGAATATGTCAAAACTGAGCTATTTGCAACTAAATGACAACCAATTGATCGGCAAGATTCCTGGTGAGCTTGGTAAACTGGAACAATTGTTTGAGTTGAATCTTGCCAATAACCTTCTTGAGGGCTCCATACCACACAACATCAGCTCTTGCACTGCCTTGAATCAGTTCAATGTTCATGGTAATCAATTAAGTGGAACCATCCCTCTCAGCTTCAGAAACCTTGAGAGTTTGACTTACTTAAATCTGTCAGCAAACAATTTCAGTGGCAGAATACCTGTTGAACTTGGGCATATTATAAATCTTGATACCCTGGATCTATCAAGCAATTGCTTTTCTGGGCCAATTCCTGCATCAGTTGGTGAGCTTGAGCATCTTCTTACGCTTAATCTGAGTAAAAATCAATTTGATGGCACGCTGCCTGCAGAATTTGGGAATCTCAGAAGCATTCAAATTATCGATCTTTCATCAAACAGAATATCCGGTGCCATTCCTCCCGAGCTGGGCCAGCTGCAGAATTTAGTGTCTCTGACTCTGAACAACAATAACTTGAGAGGAAAATTACCAGCTCAGCTAGCTAATTGCTTCAGCCTTTCGTCATTGAATGTATCATACAACAACTTGTCTGGCATACTTCCGTTGATGAGGAACTTTTCGCGTTTTTCACCTGACAGCTTCATTGGGAATCCCTTGTTATGTGGCAACTGGGTAGGATCTATATGCAGGCCTTCTGTCCCAAAAGCCAGAGTAATTTTCTCCAGGACTGCAATTGTTTGTCTAACTCTGGGAGTTATTGCATTATTCTCCTTGATAATTGTTGCTGCCTACAAATCCAACCAATCATACCAAAAGAAGGTTTCGACTAGTACTGCCCAAGGACCTCCCAAACTTGTCATCCTACACATGGATATGGCAATTCACAGCTTTGATGATATAATGAGGATTACCGATAATTTAAGCGAGAAGTTCATAATTGGGTATGGATCATCCAGCACAGTTTACAAATGCATTTTAAAGAATTCCCACCCGATTGCAATCAAGCGTCTATACAACCACCATACACACAACATACGAGAGTTTGAGACTGAGCTTGAAATCGTTGGCAGCATTAAGCATAGAAATCTAGTGACTTTGCATGGCTATGCACTGTCTCCATTTGGAAACCTCCTCTTCTATGAGTACATGGAGAATGGTTCTCTTTGGGATCTGCTTCATAGTCCCTCGAAGAAGGTCAAGCTTGATTGGGAAACTCGACTGCGGATTGCTGTTGGAGCTGCTCAGGGACTTGCATATCTTCACCATGATTGCAATCCTCGAATTGTTCACCGAGATGTTAAGTCCTCAAATATCCTTCTTGATGAAAACTTTGAGGCTCACTTATCTGATTTTGGAATTGCAAAATCTATCTCGACCTCTCAAACCCACGCTTCTACATATGTCCTTGGAACAATAGGCTACATAGATCCAGAGTATGCAGGGACCTCAAGGGTTAATGAAAAATCAGATGTTTATAGCTTTGGCATAGTTCTCCTTGAGCTACTTACTGGAAGGAAGGCAGTGGATAATGAGTCCAATTTGCATCACATGATACTTTCTAGGGCAGATAACAACACGCTTATGGAGGCCGTTGATCCTGAGGTCTCAGTGACTTGCATGGATTTGAGTCATGTGAGGAAGTGCTTTCAGCTTGCATTGCTTTGTACAAGAAGAAATCCTTCTGAGAGGCCAACCATGCATGAAGTTTCAAGGATTTTGGTGTCTCTTCTACCAGAAATCTCCACAAAAATTTCTAAAGCTCCTGCAAAGCCAGTTGATGCAAAAATTTTGATTGATAGGGGCCACCCTCAAGCAAAGAGTCAAAACCCGCAGCAAGACAACAATTCTTCTGATGCTCCATGGTTCGTTAGATTTGGTGAAGTCATTTCCAAGAACACCCTCTAA 2757 0.4215 MEEKEQVLKWSSIMGKKVEHLLCSVIGVLLVLSPLVSSLNDEAQSLMSIKASFSNVANVLLDWDNVHDGDFCSWHGVFCDNASFTVLGLDLARNQLTGEIPRLLYWNEVLQYLGLRGNLLTGVLSPDMCQLTGLWYFDVRGNNLTGKIPESIGNCSNFEILYVLSLSCALVIFLRSYSYLTMRIGRDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENQLVGPIPPILGNLTYTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNQLIGKIPGELGKLEQLFELNLANNLLEGSIPHNISSCTALNQFNVHGNQLSGTIPLSFRNLESLTYLNLSANNFSGRIPVELGHIINLDTLDLSSNCFSGPIPASVGELEHLLTLNLSKNQFDGTLPAEFGNLRSIQIIDLSSNRISGAIPPELGQLQNLVSLTLNNNNLRGKLPAQLANCFSLSSLNVSYNNLSGILPLMRNFSRFSPDSFIGNPLLCGNWVGSICRPSVPKARVIFSRTAIVCLTLGVIALFSLIIVAAYKSNQSYQKKVSTSTAQGPPKLVILHMDMAIHSFDDIMRITDNLSEKFIIGYGSSSTVYKCILKNSHPIAIKRLYNHHTHNIREFETELEIVGSIKHRNLVTLHGYALSPFGNLLFYEYMENGSLWDLLHSPSKKVKLDWETRLRIAVGAAQGLAYLHHDCNPRIVHRDVKSSNILLDENFEAHLSDFGIAKSISTSQTHASTYVLGTIGYIDPEYAGTSRVNEKSDVYSFGIVLLELLTGRKAVDNESNLHHMILSRADNNTLMEAVDPEVSVTCMDLSHVRKCFQLALLCTRRNPSERPTMHEVSRILVSLLPEISTKISKAPAKPVDAKILIDRGHPQAKSQNPQQDNNSSDAPWFVRFGEVISKNTL* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00194 918 SMART LRR_typ_2 131 155 IPR003591 -
Pte16g00194 918 SMART LRR_typ_2 299 323 IPR003591 -
Pte16g00194 918 SMART LRR_typ_2 443 467 IPR003591 -
Pte16g00194 918 SMART LRR_typ_2 419 442 IPR003591 -
Pte16g00194 918 SMART LRR_typ_2 347 371 IPR003591 -
Pte16g00194 918 SMART LRR_typ_2 227 251 IPR003591 -
Pte16g00194 918 SMART LRR_typ_2 395 418 IPR003591 -
Pte16g00194 918 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 562 666 - -
Pte16g00194 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Pte16g00194 918 Gene3D Phosphorylase Kinase; domain 1 550 666 - -
Pte16g00194 918 SUPERFAMILY Protein kinase-like (PK-like) 568 857 IPR011009 -
Pte16g00194 918 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 242 516 - -
Pte16g00194 918 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 28 858 - -
Pte16g00194 918 SUPERFAMILY L domain-like 88 199 - -
Pte16g00194 918 Gene3D Ribonuclease Inhibitor 172 516 IPR032675 -
Pte16g00194 918 ProSiteProfiles Protein kinase domain profile. 591 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00194 918 Gene3D Transferase(Phosphotransferase) domain 1 667 875 - -
Pte16g00194 918 SMART serkin_6 591 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00194 918 Pfam Leucine rich repeat 373 432 IPR001611 GO:0005515
Pte16g00194 918 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Pte16g00194 918 Pfam Protein kinase domain 595 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00194 918 ProSitePatterns Protein kinases ATP-binding region signature. 597 619 IPR017441 GO:0005524
Pte16g00194 918 SUPERFAMILY L domain-like 163 509 - -
Pte16g00194 918 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 667 868 - -
Pte16g00194 918 Gene3D Ribonuclease Inhibitor 41 162 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00194 Pte-Chr16 2292102 2298844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00194 89 919 Receptor kinase-like Gene Family AT5G07180 72.662 0.0 1209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pte16g00194 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00194 K20718 - qsa:O6P43_005490 1319.29