Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00190 ATGGAGGCACAAGAGACTTTTGCTTCTGGGCTTGCTGTGAAGGGTGATGAAGCTCCTGGAAGTTACCATGTGGCTCCTAGGAGTGAAAATAATGTCATTTGTGGGCCCACAATTCTTGCGCATACTGCTGAACCAACAAAAGAACCGGATCCGGCACTGGCACAGACTTCAGCCCCGGAAGCGGAAACGGTACCTGCTCCAGCACCACCGGCATCAGTATCAGACGCACAACCAGTGAGTGTATCTGTTTCTCCTGGTACGACAGTGAAGAAAAAGAGAGGGAGGCCTAGGAAGTACGGTCCTCATGGTTCTGTCGCATTAGCACTGTCTCCGATGCCAATCTCTTCGTGCATTCCTCTCACCGGGGAGTTCTCAGCTTGGAAACGGGGCAGAGGCCGGCCTATGGAAACCATTAAAAAGACATTTAAATATGACTACGAAGCTCCAGGTGACGAAATAGCGTACTTAGTTGGTGCAAATTTCACTCCCCATGTGTTTACTGTTAATGCTGGAGAGGATGTATCCTTGAAGATTATGTCATTCTCTCAACAAGGATCCCGTGCAGTATGCATTCTTTCGGCAACAGGCACAATCTCAAATGTCACACTTTGTCAACCTACTACTTCTTGGGGCACTCTAACTTATGAGGGTCCATTCGAGATACTTTCCTTGTCTGGTTCATTTATGCCAACAGAGAATGGACTAACCAAGAGCAGATCTGGAGGGATGAGTGTCTCTTTGGCCGGCCCTGATGGTCGAGTAGTTGGGGGAGGGCTTGCCGGTCTGTTCGTAGCTGCTGGTCCTGTCCAGGTAATGACATGCTTCCCGCAGTAA 834 0.494 MEAQETFASGLAVKGDEAPGSYHVAPRSENNVICGPTILAHTAEPTKEPDPALAQTSAPEAETVPAPAPPASVSDAQPVSVSVSPGTTVKKKRGRPRKYGPHGSVALALSPMPISSCIPLTGEFSAWKRGRGRPMETIKKTFKYDYEAPGDEIAYLVGANFTPHVFTVNAGEDVSLKIMSFSQQGSRAVCILSATGTISNVTLCQPTTSWGTLTYEGPFEILSLSGSFMPTENGLTKSRSGGMSVSLAGPDGRVVGGGLAGLFVAAGPVQVMTCFPQ* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00190 277 Gene3D - 163 274 - -
Pte16g00190 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 273 IPR005175 -
Pte16g00190 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 55 273 IPR039605 GO:0003680
Pte16g00190 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 272 - -
Pte16g00190 277 CDD DUF296 162 272 IPR005175 -
Pte16g00190 277 ProSiteProfiles PPC domain profile profile. 158 277 IPR005175 -
Pte16g00190 277 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00190 Pte-Chr16 2234692 2237907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00190 89 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 67.010 3.79e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00190 - - qsa:O6P43_005480 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00190 16 2234692 2237907 Pte9g00260 9 2946217 2951852 RCT
Pte16g00190 16 2234692 2237907 Pte16g00190 16 2234692 2237907 RCT