Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00172 ATGGCAACACAGTCTACACTGAAGGTCTTTGTTCATAGCCAGATTTCTCCGCCTGCAGGCTCAGTTCCCTCAACCTCTCTAACCCTTACTTTTCTTGATATTGTGTGGCTTTCTTGTTGCCCTATGAAACGTCTCCTATTCTATGAATTTCCCCTGTTCATCAATAACAGTACCGATGAATACTTCCTTCAAGCCATTGTTCCCAATCTCAAACACTCCCTCTCCCTCACTCTTGGTTTCTTCTATCCTTTTGCTGGTCACCTAATATGTCCTCTGCGACCCAACGAGCCACATCTTACGTACGTAGAGGGTGACTCCGTTCCTTTCATGGTGGCACAGTCTGGTGCAGATTTCGATGAACTCGTAGCTGACCAACCACAAGATGTAAAAAATTTACACCCCCTGCTTCCAAAGCTGCCTCCAACTCTCTGTGATGAAGAGGGTACGCGTACAGTTCCTCTCATGGCAATTCAAGTCACGCTCTTCTCTGGTCGTGGATATAGTATCGGTGTCACTTTCAAACACGTAGTTGCTGATGGGGTTTCTTTCCATCACTTCCTGAAAACATGGGCGTCCATTTGTGAAAATAAAAGTGAATTGACTTTTCTGGAAGACTCTTCGTTGCCATTTTATGACAGAAAGGTTATCCGAGACCCCAAGAATCTCAAGGAACATTTTCTCAATCAGTGGTGGGAGTTAACCGACGGAGCTAAGCGATTTGAAGTTGCAGATGAAGAGAAAGATGATAATGATGATGCCCTTTCTGATAAGGTCCGTGCCACTTTCTTGCTGTCACGATCTCAGATTGATAATTTGAAGAAAAGGGTGTCGTTTGAGTATGGAAGACAGAGGAAAGAGTCAGAGAAAGCTGTGAACTTTTCAAGCTTTGTTGTCGCATGTGCTTTGTTTTGGGTTTGTATGGTGAAATCAGAACAAGACCAAAACAACGTTGACAGCGAAGGTGAAGCTGTTTACCACTTGTGTTTTGCAGCAGATTATAGAAAAAGGAACTTAGAGTTTTCAGTGCCGACCTATTTTGGCAATTGTTTAGGTGTATGTTTTTCCTCACTCAAGAGGAAGGAGTTATTAGGGGACAACGCAATCTTAGAGGCATCAAAGGCAATTAGAAATTCAATTTTGGAATTGAATGACGATCCTCTGAAAGGAGCAGAAAATTGTGTTTCAGAGTTTCTTGAACGACGACAATCTGGCCACCTCATTACACTGGCTGGTTCTCCCAATTTAGGTGTATATCAAACTGATTTTGGTTGGGGAAGACCTAAGAAAAGTGAAGTTGTTCATATCGATGTCTCTGGAGCTATATCTCATTCTGATGCCAGGGATGGTGCTGGTGGGGCTGAAGTCGCTGTAGCACTTGGGAGGACTCGAATGAACGCTTTCATCCTTGCATTAGATGAATCACTAAAGACAATGTCACTAGCAAATTGA 1449 0.432 MATQSTLKVFVHSQISPPAGSVPSTSLTLTFLDIVWLSCCPMKRLLFYEFPLFINNSTDEYFLQAIVPNLKHSLSLTLGFFYPFAGHLICPLRPNEPHLTYVEGDSVPFMVAQSGADFDELVADQPQDVKNLHPLLPKLPPTLCDEEGTRTVPLMAIQVTLFSGRGYSIGVTFKHVVADGVSFHHFLKTWASICENKSELTFLEDSSLPFYDRKVIRDPKNLKEHFLNQWWELTDGAKRFEVADEEKDDNDDALSDKVRATFLLSRSQIDNLKKRVSFEYGRQRKESEKAVNFSSFVVACALFWVCMVKSEQDQNNVDSEGEAVYHLCFAADYRKRNLEFSVPTYFGNCLGVCFSSLKRKELLGDNAILEASKAIRNSILELNDDPLKGAENCVSEFLERRQSGHLITLAGSPNLGVYQTDFGWGRPKKSEVVHIDVSGAISHSDARDGAGGAEVAVALGRTRMNAFILALDESLKTMSLAN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00172 482 PANTHER - 7 476 - -
Pte16g00172 482 Pfam Transferase family 14 467 - -
Pte16g00172 482 Gene3D - 254 477 IPR023213 -
Pte16g00172 482 Gene3D - 7 243 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00172 Pte-Chr16 2029078 2031085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00172 70 467 Monolignol Biosynthesis Gene Families AT5G48930 25.962 1.52e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00172 - - qsa:O6P43_009804 419.853