Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00155 ATGGAGTACGGCGGTGGAAGTGGCTCCGGCGGTGGAGACCATCACCATGATGCTTCTGGTTCTCAGGGAAGGAGGAAGCGCTATCATCGTCACACCGCTCATCAGATTCAAAGGCTTGAAGCAACCTTCAAAGAGTGTCCCCACCCAGATGAGAAGCAGAGGACTCAGTTAAGCAGAGAGTTGGCATTAGCTCCACGCCAAATCAAGTTTTGGTTTCAGAATAGGAGAACCCAGATGAAGGCTCAACACGAAAGAGCTGACAATTGTGCACTGCGAGCTGAGAACGACAAGATACGATGTGAGAATATAACAATCAGAGAGGCACTGAAGAATGTCATATGCCCTACTTGTGGTGGCCCTCCTATAAATGAAGATACCTACTTTGATGAACAGAAGTTGAGAATGGAGAATGCTCAACTGAAAGAAGAGCTTGATAGAGTATCTAGCATAGCAGCCAAGTATATGGGAAGACCATTTTCCCAACTCCCACCTGTTCAGCCAATTCATATATCTTCACTGGATTTGACAATGGGAAGCTTAGGATATCATGGGATTCCTGCAGGACCTTCTCTTGATCTTGATCTTCTTCCAGGCAGTTCTTCGACATTGCAAAGCTTGCCTTTTCAGCCTGCTCTCCTCTCAGACATGGACAAGTCCCTTATGACAGATATTGCAACCAATGCAATGCAAGAACTGCTGAGACTTCTACAGACCAATGAACCTCTATGGATGAAATCTAGCACCGATGGAAGGGATATCCTCAATTTTGAAAACTACGAAAGGATATTTCCGAGGACTAATAGTCACTTGAAAAATCCCAATATTCGAATTGAAGCATCCAGAGATTCTGGGGTTGTAATCATGAATGGTTTGGCTTTAGTTGACATGTTCATGGACTCTAACAAGTGGATGGATCTATTTCCTACAATTGTGTCAATGGCAAGAACATTTGAAGTAATTTCAACTGGGATGTTAGGTGGTCATAGTGGTGCTTTGCTGCTGATGTATGAAGAGTTGCAAGTACTTACCCCACTTGTTCCAACAAGGGAGTTTTATTTTCTTCGCTACTGCCAGCAAATAGAGCAAGGCTCATGGGCTATTGTGGATGTTTCTTACGATTTTCCTCAAGATATCCAATTTTCTACTCAAAATCAATCTCGAAGGCTCCCTTCTGGATGTTTGATCCAGGACATGCCAAATGGATATTCCAAGGTTGTCACATGGGTTGAACATGTCGAAATAGAAGAGAAGATGCCAGTTAATCGCCTTTACCGCGATCTGATTTATAGTGGTTTAGCATTTGGAGCTGAAAGATGGCTCACTACTCTGCAGAGAATGTGTGAAAGATTTGCTTGTCTAATGGTGTCCGGCACATCTACTCGTGATCTTGGAGGAGTGATACCATCTCCCGATGGCAAGAGAAGCTTGATGAAACTTGCACAAAGGATGGTGAACTATTTCTGTGCTAGCATTAGCACATCAAATGGCCATAGATGGACAACACTTTCTGGATTGGACGAGATAGGTGTGAGAGTTACTATCCAAAGAAGCACAGATCCTGGCCATTCTAATGGTATGTTGCTTAGTGCAGCCACTACAATCTGGCTTCCCGTTTCCCCTCAAAATGTCTTCAACTTCTTCAAGGATGAGAGAAGACGATCTCAATGGGATGTTCTCTCCAACGGCAATTCAGTCCAAGAGGTTGCTCATATAGCGAATGGTTCACATCCTGGCAACTGTATTTCTGTTCTCAGGGCTTTTAATACAAGTCAGAATAACATGCTGATACTCCAAGAGAGTTGCATAGACTCATCTGGATCACTTGTGGTGTATTCTCCAGTGGATTTGCCAGCCATTAACATTGCAATGAGTGGAGAAGACCCTTCCTATATTCCACTGCTACCATCAGGGTTTATCATATCCCCAGATGGTCAACCAGACCAAGATGGAGCTTCAACAAGCTCACACACACACGGTAACATGGGTAGGTCAAGTGGTTCACTCATTACAGTGGCATTTCAAATACTTGTCAGCAACTTGCCATCTGCAAAACTGAACTTGGAGTCTGTGACAACCGTTAATAACCTCATTGGCACCACTGTCCAGCAAATAAAGTCTGCCTTGAATTGTCCTAGTTCCTGA 2142 0.4384 MEYGGGSGSGGGDHHHDASGSQGRRKRYHRHTAHQIQRLEATFKECPHPDEKQRTQLSRELALAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENITIREALKNVICPTCGGPPINEDTYFDEQKLRMENAQLKEELDRVSSIAAKYMGRPFSQLPPVQPIHISSLDLTMGSLGYHGIPAGPSLDLDLLPGSSSTLQSLPFQPALLSDMDKSLMTDIATNAMQELLRLLQTNEPLWMKSSTDGRDILNFENYERIFPRTNSHLKNPNIRIEASRDSGVVIMNGLALVDMFMDSNKWMDLFPTIVSMARTFEVISTGMLGGHSGALLLMYEELQVLTPLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPQDIQFSTQNQSRRLPSGCLIQDMPNGYSKVVTWVEHVEIEEKMPVNRLYRDLIYSGLAFGAERWLTTLQRMCERFACLMVSGTSTRDLGGVIPSPDGKRSLMKLAQRMVNYFCASISTSNGHRWTTLSGLDEIGVRVTIQRSTDPGHSNGMLLSAATTIWLPVSPQNVFNFFKDERRRSQWDVLSNGNSVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCIDSSGSLVVYSPVDLPAINIAMSGEDPSYIPLLPSGFIISPDGQPDQDGASTSSHTHGNMGRSSGSLITVAFQILVSNLPSAKLNLESVTTVNNLIGTTVQQIKSALNCPSS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00155 713 SMART START_1 223 449 IPR002913 GO:0008289
Pte16g00155 713 SUPERFAMILY Bet v1-like 470 705 - -
Pte16g00155 713 MobiDBLite consensus disorder prediction 646 661 - -
Pte16g00155 713 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Pte16g00155 713 ProSiteProfiles START domain profile. 214 452 IPR002913 GO:0008289
Pte16g00155 713 MobiDBLite consensus disorder prediction 1 32 - -
Pte16g00155 713 CDD homeodomain 24 83 IPR001356 GO:0003677
Pte16g00155 713 CDD START_ArGLABRA2_like 218 448 - -
Pte16g00155 713 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 22 709 IPR042160 -
Pte16g00155 713 SUPERFAMILY Homeodomain-like 7 82 IPR009057 -
Pte16g00155 713 FunFam Homeobox-leucine zipper protein HDG1 12 98 - -
Pte16g00155 713 Pfam Homeodomain 25 80 IPR001356 GO:0003677
Pte16g00155 713 SUPERFAMILY Bet v1-like 215 450 - -
Pte16g00155 713 FunFam Homeobox-leucine zipper protein GLABRA 2 223 448 - -
Pte16g00155 713 SMART HOX_1 23 86 IPR001356 GO:0003677
Pte16g00155 713 MobiDBLite consensus disorder prediction 642 661 - -
Pte16g00155 713 Gene3D - 12 96 - -
Pte16g00155 713 Coils Coil 130 150 - -
Pte16g00155 713 ProSitePatterns 'Homeobox' domain signature. 57 80 IPR017970 GO:0000981|GO:0006355
Pte16g00155 713 Pfam START domain 224 449 IPR002913 GO:0008289
Pte16g00155 713 Gene3D - 221 445 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00155 Pte-Chr16 1865978 1869266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00155 24 713 Homeobox Transcription Factor Family AT1G73360 68.714 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte16g00155 START 1.4e-45 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00155 K09338 - tcc:18587139 1200.27