Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00152 ATGGCGGATATTAACTCCGTTGACGTGATATTGGACTTCTTAAGGAGAAACAAATTTTCAAGAGCGGAGGCTGCTTTACGCTGCGAGCTCAGTGGTCACCCGGACTTGAACGTTTTCCTTCAAAAACACATTCTGGAAGAAAAGACATCAGGTAATACGTCAAAAGATGATGGGAGGAAACCTTTGGAAACAGGTTTTCGAGAAAGTGGCGAACTTTCAAAGGAATTGATTGTGAAGGAGATAGAGTGTGGGCCTGGAAGAAATGTGTCTGATAGCAAACGGAAGTCTGTAAATTTTGTTGGAGAACAGATTAAGTCTAATGAAGTGGCTGGGAAAAGTGGCAAGGACTTTACGTTCTCCATTGGTTCAGATGATACTATTCTTGATTTATACACTTGGAAGTTCGATTCCTGCAATGTTCCTGACCAATCTAATCAGATTTATTGTGGTAGTTGCGCCGATAGCAATTCAGAGGCACAGATCTCTGAGCAATCAAAATATCATTTGAATGAACTTGTAGATGACAGCAAATGCAATGGTCTATCTGGAAAAGACACTCTACATGTCAGTGAAAGAAGTTCTTGGCTTGGAAGTAGTAGTAACAATTCTACGGAGCCAAAGTATGATATGCCCCAAACGAGTGAACAAGTGGACCTTGGCCACCAGCTTAAGTTTAATAATTCATATTTGAAAGAGAATTTCACCGATGGAACGTGGCCAAGAGCTGAAGATAATGCCAAATCATCTTTTAATGTGCTGAAAGATTGTTCTGTCAAGACTGTTTTTCCATTTTCAAAGCAAGATATTTTGAAAAGTTATGAAGTTGCAAGCAGCTTGGAGAAAGAGGATGAAAAAGGGAAAGCAAAATTTAATGATATAAGAGCATCTATAAAGAATCAGGTCAATGAAGTAGGAAGAGCACTTTACTGTGGCAAATCTACTACCAATAGTGAGGAGAAGAGCCTTAGCAGCTTGGATATTTCTCTTGTACCCGAGTACCAAAAAGAAGAATTCCCTCGGCTGCCTCCTGTTAAGCTCAAGTCGGTAGACAAACTCTTGAATGTTAACTGGGAAGGGAAGTTTGAGAAAGATGGATCTTCTTCAAAATTCACCACTACTGATAACAACCTTCTTATTGGGTCATACCTGGATGTGCCTGTTGGACAAGAAATCAGTTCGGCAGGAATGAAAAGGCTTGCAGGGGGCAGTTGGCTATCTGTGAGTCAGGGAATTGCAGAAGATACATCTGATCTGGTTTCTGGTTTTGCCACTGTTGGTGATGGTTTTAGTGAATCTGTTGATTATCCAAATGAGTATTGGGACTCTGATGAATACGATGATGATGATGATGTTGGCTACATGAGGCAGCCTATTGAGGATGAAGCCTGGTTTTTGGCTCACGAAATTGATTACCCAAGTGACAACGAGAGGGGAACTGGGCAGGGGAGTGTTCCAGATCGACAGGAGAGAGGTCCAACTAATGATGATGATGATCAATCTTTTGCTGAGGAAGATTCATACTTCTCTGGGGAGCAATATCTGCATGGGAAAAATGTTGAGCCATTCAGAAAATCAGGTGATCCCCATGGTATAACAGTGACCGAAGTGTATGAGGGAAGACACAAGAGTGATTTGATCGCTCAATATGATGGAAACTTGATGGATGAAGAAGAACTGAAACTAATGCGTGCTGAGCCTGTCTGGCAGGGGTTTGTCACTCAGTCAAATGAACTAGTCATGCTGGGTGATGAAAAACTTCTGCAGGACTCGGGAAGATCACAGATCAATGATATTTGCATTGGTGATGATCAACATGGATCTGTCAGATCAATTGGTGTAGGAATCAACAGTGATACTGCAGATGTTGGCAGTAAAGTGCATGAGAGTTTAGTTGTGGGAAGTAGTGGAAGGGATGTAGAATATTTTCATGATCGTATTGTTGGCCTCAGTGAGTCCACGAATTCTCATCGTGAATATGACAAGAAATATGTTGATGAATCAAGCGAAGATAAAAAGAAAACCATGAAGCAAGATTTAAATAAATATGTGGTTGGGGCTGACAAAGCTGGTTCGTTGCAGTTGAAAAGTCACAAGGATGGAGGCTTCTCATTTCCTCCCCCACTGAAAAATGGACAGTTGGATCAGGTTGGTTCTAGTAAGTCTTTATGGGCAAATAATAACAGTGTTGTTATTTGTGATGAGACTGATGACTACCTCAATGGGGATCCAAGTTCTGATGAGATGTTGACTACATGGAGATGCAAGAGCAGTGATTCTTCACCTGTGAAGAGTTCTAGAGATGATAACAATGGTAGTGCTACGAGATCCCAAACTTCAACTCCTTCCACTGTTTCGCATTATGGATATGTGGAAAGAGATCTCGCCGAGGCAGGAGAGGATGAAAAATTTGCTTCTGCAAGAGAAGAAGAACCTGGGGCATCAATTGAGGATGAAGAAGCTTCTGCAGTTCAAGAGCAAGTGAGGCAGATAAAGGCTCAGGAGGAAGAGTTTGAGACTTTCAACCTCAAGATTGTGCATAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAACTTCCATGTTGTTTTAAACTCTGTAATAGCTGGAAGATATCATGTGACCGAGTATCTTGGATCTGCTGCATTCAGCAAAGCTATACAAGCCCATGACCTGCATACAGGAATGGATGTCTGCATTAAAATTATAAAGAACAACAAAGACTTTTTTGACCAGAGTCTTGATGAGATTAAGCTTCTAAAGTATGTCAATAAACATGATCCCGCTGATAAGTACCACACCCTCAGACTATATGATTACTTCTACTACCGAGAGCACTTGTTAATAGTGTGTGAACTACTCAAGGCAAACTTGTATGAGTTCCATAAATTTAATCGAGAATCAGGTGGTGAAGTATACTTTACGATGCCAAGACTGCAATCAATTACCATTCAGTGTTTAGAAGCACTTCAGTATTTGCACAGCCTCGGACTTATACATTGTGACTTGAAGCCGGAGAATATATTGGTAAAAAGCTACAGTAGATGTGAGGTGAAGGTCATTGACCTCGGTAGTAGTTGTTTCGAGACAGATCATCTCTGCTCATACGTTCAATCCAGGTCTTATCGTGCCCCTGAGGTTATATTGGGGCTTCCATATGACAAGAAGATTGACATCTGGTCACTTGGATGCATTTTGGCAGAACTTTGCACAGGCAATGTTCTCTTCCAAAATGATTCTCCGGCAGCGCTACTTGCACGAGTCATTGGAATCATTGGTTCAATTGATCAAAGCATGCTGGCAAAGGGAAGAGATACATACAAGTACTTTACAAAAAATCACATGCTTTATGAACGGAACCAGGAAACAAACAGGTTAGAGTACCTAATTCCCAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGATCAAGGGTTTATTGATTTTGTTGCACATTTGCTTGAGATCAACCCAAAGGAGAGACCTTCTGCTACTGAAGCCTTGAAGCATCCCTGGCTTTCATATCCATACGAGCCAATTTCATCCTGA 3549 0.4131 MADINSVDVILDFLRRNKFSRAEAALRCELSGHPDLNVFLQKHILEEKTSGNTSKDDGRKPLETGFRESGELSKELIVKEIECGPGRNVSDSKRKSVNFVGEQIKSNEVAGKSGKDFTFSIGSDDTILDLYTWKFDSCNVPDQSNQIYCGSCADSNSEAQISEQSKYHLNELVDDSKCNGLSGKDTLHVSERSSWLGSSSNNSTEPKYDMPQTSEQVDLGHQLKFNNSYLKENFTDGTWPRAEDNAKSSFNVLKDCSVKTVFPFSKQDILKSYEVASSLEKEDEKGKAKFNDIRASIKNQVNEVGRALYCGKSTTNSEEKSLSSLDISLVPEYQKEEFPRLPPVKLKSVDKLLNVNWEGKFEKDGSSSKFTTTDNNLLIGSYLDVPVGQEISSAGMKRLAGGSWLSVSQGIAEDTSDLVSGFATVGDGFSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNERGTGQGSVPDRQERGPTNDDDDQSFAEEDSYFSGEQYLHGKNVEPFRKSGDPHGITVTEVYEGRHKSDLIAQYDGNLMDEEELKLMRAEPVWQGFVTQSNELVMLGDEKLLQDSGRSQINDICIGDDQHGSVRSIGVGINSDTADVGSKVHESLVVGSSGRDVEYFHDRIVGLSESTNSHREYDKKYVDESSEDKKKTMKQDLNKYVVGADKAGSLQLKSHKDGGFSFPPPLKNGQLDQVGSSKSLWANNNSVVICDETDDYLNGDPSSDEMLTTWRCKSSDSSPVKSSRDDNNGSATRSQTSTPSTVSHYGYVERDLAEAGEDEKFASAREEEPGASIEDEEASAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHTLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPAALLARVIGIIGSIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKERPSATEALKHPWLSYPYEPISS* 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00152 1182 MobiDBLite consensus disorder prediction 472 501 - -
Pte16g00152 1182 FunFam Serine/threonine-protein kinase ppk15 950 1174 - -
Pte16g00152 1182 MobiDBLite consensus disorder prediction 744 786 - -
Pte16g00152 1182 ProSiteProfiles Protein kinase domain profile. 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00152 1182 Gene3D Phosphorylase Kinase; domain 1 865 952 - -
Pte16g00152 1182 SMART serkin_6 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00152 1182 Gene3D Transferase(Phosphotransferase) domain 1 925 1173 - -
Pte16g00152 1182 PANTHER DUAL SPECIFICITY PROTEIN KINASE 403 1173 - -
Pte16g00152 1182 Pfam Protein kinase domain 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00152 1182 MobiDBLite consensus disorder prediction 192 213 - -
Pte16g00152 1182 MobiDBLite consensus disorder prediction 743 788 - -
Pte16g00152 1182 SUPERFAMILY Protein kinase-like (PK-like) 860 1175 IPR011009 -
Pte16g00152 1182 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Pte16g00152 1182 FunFam Putative serine/threonine-protein kinase dyrk2 865 952 - -
Pte16g00152 1182 Coils Coil 823 843 - -
Pte16g00152 1182 CDD PKc_DYRK_like 871 1173 - -
Pte16g00152 1182 MobiDBLite consensus disorder prediction 803 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00152 Pte-Chr16 1813160 1819861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00152 870 1168 MAP Kinase Gene Family AT5G19010 31.661 9.88e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pte16g00152 Pkinase 9.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00152 - - cave:132185888 1709.89