Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00147 ATGGACGGGGATAATGGTTTGAATATGCGTAATTGGGGTTACTATGAACCCACGTCATCCCTTAAGGAACATCTTGGTCTTCAGCTAATGTCATCCATGCCTGAAAAACCTCTATTTGGAGCGCGCAACCCTGTGATTTTCAGTGGCACAAATGCTGCATACCATTACAGGGATATTGGGGTTTCTCAATCAACATTCCCTATGGACTACATGAGAAATGCTTGGATTAATCAGAGGGAGAAATATTTCAATATGATACCTGGAAATCCCAGCTGTGCTGTTATACCTGAGACCTCATCGGCTCATCAAATGCAAATGGTTCAACAAACTGATATGTCCAGAGAAGAAAGAGTATTAGAAGTGGCAGCTGCGGAGAAGACTGATGTCTCTAATGGGAAGAGGCAGCGACCTAAGACACCCAAATCTCCTAAAGGGAAGAAGCCTAAGAGAGACCTGAAGAAGGATGAGAACAGTCCAGTAGCTCCACGAGCAAGGTCTACAAAGAAAACTGCTGAAGTTATAATAAATGGGATTGATTTGGACATTCGCAGCATCCCAATTCCAGTTTGCTCATGCACTGGGACACCCCAACAGTGTTACCGATGGGGCTCTGGTGGGTGGCAGTCTGCATGTTGTACAACAGGCATGTCTATCTATCCATTGCCCATGAGTACCAAAAGGCGTGGAGCCCGAATAGCTGGAAGGAAAATGAGTATAGGAGCATTCAAGAAAGTATTAGAGAAACTAGCGGCTGAAGGATATAATTTCTCTGATCCCATTGACTTGAGAACTCACTGGGCAAAGCATGGCACCAACAAATTTGTCACTATCAGGTAG 837 0.4456 MDGDNGLNMRNWGYYEPTSSLKEHLGLQLMSSMPEKPLFGARNPVIFSGTNAAYHYRDIGVSQSTFPMDYMRNAWINQREKYFNMIPGNPSCAVIPETSSAHQMQMVQQTDMSREERVLEVAAAEKTDVSNGKRQRPKTPKSPKGKKPKRDLKKDENSPVAPRARSTKKTAEVIINGIDLDIRSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSDPIDLRTHWAKHGTNKFVTIR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00147 278 Pfam GAGA binding protein-like family 1 278 IPR010409 -
Pte16g00147 278 SMART GAGA_bind_2 1 278 IPR010409 -
Pte16g00147 278 PANTHER - 1 278 IPR010409 -
Pte16g00147 278 MobiDBLite consensus disorder prediction 123 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00147 Pte-Chr16 1697565 1699234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00147 1 279 BBR or BPC Transcription factor family AT2G01930 49.158 8.48e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte16g00147 GAGA_bind 4.1e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00147 - - qsa:O6P43_008440 432.565