Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00146 ATGGACGGGGATAATGGTTTGAATATGCGTAATTGGGGTTACTATGAACCCACGTCATCCCTTAAGGAACATCTTGGTCTTCAGCTAATGTCATCCATGCCTGAAAAACCTCTATTTGGAGCGCGCAACCCTGTGATTTTCGGTGGCACAAATGCTGCATACCATTACAGGGATATTGGGGTTTCTCAATCAACATTCCCTATGGACTACATGAGAAATGCTTGGATTAATCAGAGGGAGAAATATTTCAATATGATACCTGGAAATCCCAGCTGTGCTGTTATACCTGAGACCTCATCGGCTCATCAAATGCAAATGGTTCAACAAACTGATTTGTCCAGAGAAGAAAGAGTATTAGAAGTGGCAGCTGCGGAGAAGACTGATGTCTCTAATGGGAAGAGGCAGCGACCTAAGACACCCAAATCTCCTAAAGGGAAGAAGCCTAAGAGAGACCTGAAGAAGGATAAGAACAGTCCAGTAGCTCCACGAGCAAGGTCTACAAAGAAAACTGCTGAAGTTATAATAAATGGGATTGATTTGGACATTCGCAGCATCCCAATTCCAGTTTGCTCATGCACTGGGACACCCCAACAGTGTTACCGATGGGGCTCTGGTGGGTGGCAGTCTGCATGTTGTACAACAGGCATGTCTATCTATCCATTGCCCATGAGTACCAAAAGGCGTGGAGCCCGAATAGCTGGAAGGAAAATGAGTATAGGAGCATTCAAGAAAGTATTAGAGAAACTAGCGGCTGAAGGATATAATTTCTCTGATCCCATTGACTTGAGAACTCACTGGGCAAAGCATGGCACCAACAAATTTGTCACTATCAGGTAG 837 0.4456 MDGDNGLNMRNWGYYEPTSSLKEHLGLQLMSSMPEKPLFGARNPVIFGGTNAAYHYRDIGVSQSTFPMDYMRNAWINQREKYFNMIPGNPSCAVIPETSSAHQMQMVQQTDLSREERVLEVAAAEKTDVSNGKRQRPKTPKSPKGKKPKRDLKKDKNSPVAPRARSTKKTAEVIINGIDLDIRSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSDPIDLRTHWAKHGTNKFVTIR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00146 278 MobiDBLite consensus disorder prediction 137 151 - -
Pte16g00146 278 PANTHER - 1 278 IPR010409 -
Pte16g00146 278 Pfam GAGA binding protein-like family 1 278 IPR010409 -
Pte16g00146 278 SMART GAGA_bind_2 1 278 IPR010409 -
Pte16g00146 278 MobiDBLite consensus disorder prediction 123 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00146 Pte-Chr16 1654163 1655832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00146 1 279 BBR or BPC Transcription factor family AT2G01930 49.495 6.67e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte16g00146 GAGA_bind 1.8e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00146 - - qsa:O6P43_008440 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00146 16 1654163 1655832 Pte16g00146 16 1654163 1655832 RCT