Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00138 ATGGCAGTGGTCCGAGAACGCCGGAACCCCAACCTCCGTCTCCCTTTACCGGAGCCCTCTGAACGCCGCCCACGTTTCCCACTTCCTCTTCCACCTTCTTCCAGTACTTCAACCAACACAAACTCCTTCTTTGCCTCTTCCGACCTTGAAAAGCTTAGTGTTCTTGGCCATGGCAATGGTGGCACTGTTTACAAAGTGCGCAACAAGCGTACCCACTCCATTTACGCCCTTAAGGTCGTCCAAGCTGACTCTGACACCTTAACTCGCCGTCAGGTTCTCAGGGAGATGGAGATCCTCCGCCGTACGGACTCGCCTTTCGTCGTTCAGTGTCACGGTTTCTTTGATAAGCCGTCAGGTGACATAGCGATTTTGATGGAATACATGGAGTCGGGTACGCTGGACCATTTGCTGAAGAGAAATGGGACTTTCTCGGAGCCCCAACTTGCTACAGTAGCGCGTCAGGTTCTCAACGGGTTGAGTTACCTTCACGCTTTGAAGATCGTTCACCGGGATATCAAGCCCTCTAATCTTCTAGTGAATAAAAACATGGAGGTGAAGATCAGTGACTTTGGTGTGAGTAAGATCATGTGCCGTACGTTGGATGCGTGTAATTCATACGTGGGTACGTGCGCGTACATGAGTCCCGAGCGGTTCGACCCGGATAGATATGGTGGAAGTTATGACGGTTATGCAAGTGATATATGGAGTTTGGGTTTGACCCTGATGGAGCTTTACATGGGTCATTTCCCATTTCTTGCGAAGGGTCAAAGACCCGATTGGGCCACTTTGATGTGTGCAATTTGTTTCGGAGATCCGCCGGCCTTGCCGGTCGGAGTATCGGACGAGTTTCAGAGTTTCGTGGAGTGTTGCTTGCAAAAGGAATCATGTAAGAGGTGGACGGCACCTCAACTTTTAACCCATCCGTTTTTAGGCAAGTACTAG 942 0.5042 MAVVRERRNPNLRLPLPEPSERRPRFPLPLPPSSSTSTNTNSFFASSDLEKLSVLGHGNGGTVYKVRNKRTHSIYALKVVQADSDTLTRRQVLREMEILRRTDSPFVVQCHGFFDKPSGDIAILMEYMESGTLDHLLKRNGTFSEPQLATVARQVLNGLSYLHALKIVHRDIKPSNLLVNKNMEVKISDFGVSKIMCRTLDACNSYVGTCAYMSPERFDPDRYGGSYDGYASDIWSLGLTLMELYMGHFPFLAKGQRPDWATLMCAICFGDPPALPVGVSDEFQSFVECCLQKESCKRWTAPQLLTHPFLGKY* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00138 313 ProSiteProfiles Protein kinase domain profile. 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00138 313 SMART serkin_6 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00138 313 Gene3D Transferase(Phosphotransferase) domain 1 125 313 - -
Pte16g00138 313 FunFam Mitogen-activated protein kinase kinase 1 31 129 - -
Pte16g00138 313 FunFam Mitogen-activated protein kinase 2 130 313 - -
Pte16g00138 313 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 36 311 - -
Pte16g00138 313 CDD PKc_MAPKK_plant_like 47 313 - -
Pte16g00138 313 Gene3D Phosphorylase Kinase; domain 1 32 124 - -
Pte16g00138 313 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Pte16g00138 313 SUPERFAMILY Protein kinase-like (PK-like) 47 310 IPR011009 -
Pte16g00138 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pte16g00138 313 MobiDBLite consensus disorder prediction 1 42 - -
Pte16g00138 313 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00138 Pte-Chr16 1514782 1516161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00138 1 310 MAP Kinase Kinase Gene Family AT1G73500 64.630 4.25e-139 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pte16g00138 Pkinase 1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00138 K20604 - qsa:O6P43_008459 472.241