Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00134 ATGGCCAAATGCGAGGGGTATAAAGTTGGCGGTGAAGCTAGAGCAACGCCCACGGAACACCCGAGCCTCGTAGCCGTTAATGTGCAAGTGTCTAGACAGTTGAGATGTGATTTCCTTTTCACCAACAGACAAACTCTTGGCCTAGCTCTCTTCTTCAATCTCTCGTGCAAACTCTTGGTGACGGACTCTCAGACATCTCTCTCCTTTTTCACCAACAGACAGACTCTTGGCCTAGCTCTCTTCCTCAATCTCTCACGAACCTACAGATTCGATAGGAGGAATTCGTTGTCGACATACAGTGGCATGGAACATACACTTGATACGAGCCAACGTCAAGAAAATCCCAGAAGCACCGCGAGAAAAGAAGTCACAAAAATTCAGTCTCCCTTTCTCTTTGGGAACCGTACGAGAAGTAAAAGAAGAGGAAAAAAGTTAACAATTGGTTGTGATTTTTACCATCAGACTTCTTGGTCGATCAGTACGGGGTCTGCGGATACGAGCTCCAGGTGTTGGGCAGCAAGGGAAATGACCTCCCAAGTAAGGATTGAGAGAAGAGATAGGTCTAGATTTCCTGCTCAAAACGCCAGGAGAGAATGGGTTCCTAGGGGAACTACGGGTGCTGTAGTTGAAAGCTCTCCGTCTTGTATCAATTCGGAGCAAAATGTCCAACATGCTGGTTTTGTTCAACAAGAGATTCCACAAAGAAGCAATATTAGTTCAAGGAGGCATTCGGGTCTTAACTCGACACAAAATGAGGATCATGGTGGGGGTTTGAATCATAATGTTTCTCAACAGGAGAAGAGGCAAAGGAGCAATTATAGTCCAAGAAGTCTTAGTTTGGAGCAGAATGTTGATCATAGTGAGGGCTTGCTTCATACCATTTCTCAACACACGAGTCAGCAAAGAAGCAATCATGGTTTAAGAGGGTCTGCAGGTCAACCTGTAAATCAACGGAGGGAAAGGGAGAAGGAGAAGGTGACAGGTGCGAACCAGGCAGAGAATATTTGGAAGGATCCTAATTTGCCTCAGCTGGTGCATGAAATTCAGGAGAAGCTGATGAAGGGTACCATTGAATGCATGATTTGCTACGATATGGTGCGAAGATCAGCGCCTGTTTGGTCTTGTTCAAGCTGTTACTCTATTTTCCATCTGAATTGTATAAAGAAATGGGCTAAGGCACCTACTTCTGTTGACTTGTCTGCTGAGAAGAATCAAGGATTTAATTGGAGGTGTCCTGGTTGTCAATCTGTGCAACTAATGTCTTCAAAGGAAATTAGGTATCTTTGCTTCTGTGGGAAGAGACCAGACCCGCCTTCTGATTTGTATTTGACTCCCCATTCATGCGGGGAACCATGTGGAAAGCAGCTAGAGAAGATGGCAGTTGCTGGAGTCAGCAAGGAGGACCTTTGTCCTCATAATTGTGTCTTACAATGTCATCCAGGTCCCTGTCCTCCATGCAAGGCATTTGCTCCAGCACGTCTTTGTCCTTGTGGGAAGAAAACAATCACAACAAGATGCTCAGACCGACAGTCTGTTCTCACCTGTGGCCAACGCTGTGATAAGCTTCTTGAGTGTGGGCGGCATAGATGTAAGCAGATCTGCCATGTTGGTCCTTGTGATAATTGTGAAGTTCCAATTAATGCCTCTTGTTTTTGCCAGAAGAAGGCAGAAATGATTCTATGTGGGGAAATGGTTGTGAAAGGGGATATAAAAGCAGAAGATGGGGTCTTTTCCTGTGATTCCACCTGTTGTAAGAAACTTGATTGTGGCAATCACATTTGCGTTGAAACTTGCCATCCAGGGAGCTGTGGCGTGTGTAATTTGTTGCCAAGCCAGTTAAAATCATGTTACTGTGGCAAGACAAGCTTGAAAGAGGAACGCAAGAGTTGCCTTGATCCAATACCAACTTGTTCACAAACATGTGGCAAGCCCCTTTCCTGTGGGATTCATCATTGTGGGGATGTGTGTCATGCGGGTGATTGCCAGCCGTGCATGGTTCAGGTTTCCCAAAAGTGCCGTTGTGGTTCAACATCACGAGATGTTGCATGTTATAAAACTACCATGGAAAATGAAAAATATTCTTGTGATAGGCCTTGTGGCCAGAAGAAGAACTGCGGCAGGCACCGGTGCAGTGAACGCTGCTGTCCTCTCTCTAATCCACACAATAACTGGAATGGAGATTGGAATCCTCATGTTTGCTCAATGACATGTGGAAAGAAGCTAAGATGCGGACAGCATGCATGTGAATCCTTATGTCACAGTGGACATTGCCCGCCTTGTCTTGAAACAATTTTTGGTGATTTAACCTGTGCTTGTGGGAGAACTTCTATCCCTCCTCCATTGCCTTGTAGCACTCCTCCTCCTTCTTGCCAGTTGCCATGTTCTGCTCCGCAACCTTGTGGCCATCCGGCTTCACATAGCTGCCATTTTGGAGACTGTCCACCCTGTTCAATGCCTGTAGCTAAAGAATGCATTGGTGGGCATGTTATTCTTCGAAATATACCTTGTGGATCAAAAGACATAAGGTGTAACAAACTCTGTGGTAAGACACGACAGTGTGGCTTACATGCTTGCGGTAGAATTTGTCATCAACCACCTTGTGATGTGGTGGTTAATTCAGAAAATGGCCTTAGAGCCTCTTGTGGGCAAACTTGTGGTGCTCCTAGAAGGGATTGCCGGCATACTTGCAAAGCTCCTTGTCACCCTTCAGCTCCCTGTCCGGATATGAGATGTGATTTTCCTGTAACGATTACTTGCTCTTGTGGTCGGATAACAGCAACAGTGCCTTGTGGCACTGGAGGTAGCATTGGTAACGTCAGCATTGATACAGTATATGAAGTGTCTGTAATTCAGAAATTGCCTGTCCCCCTTCAACCGATTGAATCAAATGGGAAGAAAATCCCTCTTGGGCAGAGGAGGCTGACTTGTGATGATGACTGTGCTAGACTAGTGCGTAAGACTGTTCTTGCCGAAGCTTTTGACATATCTACACCAAATCTCAACGCCCTTCATTTCGGTGATTCAGCTGCTTCTGAATTGATTGCTGACCTGTACAGACGTGATCCAAAATGGGTATTATCGGTTGAAGAGAGGTGCAAGTATTTAGTTCTTGGCAAGGTTAGGGGGATCACTACAGGTGTAAAAGTGCATGTTTTCTGTCCTATGCTGAAAGAGAAGAGAGATGCCGTCAGGATAATCGCTGAATGGTGGAAGCTAGCTGTGAATGCTGCTGGTTGGGAGCCGAAAGGATTTGTTGTGGTTCATGTTACTCCAAAGTCGAAGCCTCCATTAAGAATGCTCGGGGTCAAGGGCACCTCAACAGTGAACTCACCTCATGCTCCTTCATTTGATCCTGTGGTCGACATGGATCCGCGCCTTGTTGTCTCATTTCTCGACTTGCCTAGGGAAGCAGAAATAAGCGCACTGGTCCTGAGATTTGGTGGTGAATGTGAACTGTTATGGTTGAATGACAGAAATGCATTGGCAGTTTTCCACGATCCTGCTCGAGCTGCAACAGCTATGAGGAGGTTGGATCATGGATCAGTGTATCATGGCGCTGTTGTGTTCTCCCATGCTGGAACTTCGGCAGCAGCTTTAGCCACTAATGTGTGGGGAGGACCAGCATTGAAAGGGAATCCTTGGAAGAAGGCCGTGATTCAGGAGGCAAGTTGGAAAGAAGATGCCTGGGGTGAGGAAGATTGGTCAAGTGGTTCTGTCGATGTTCAACCATCTGTGTGGAAGAAAGAGGCTCCGGTTGTAGCTTCCTTAAACCGCTGGAGTGTCTTGGCCCCGGAATCAACTCTGAGTTCTCATGTGTCAACTCTCAAAGCGGAGAGTCCTGTGAAGCATGCAGCTAACCATACTGTTTCACCCTATGCTGGCACTTCAAGTACTACAGTCCAACTGAGAGAGAATGTGTCTGAAACAGAAACTTCTGAAGTAGTGGAGGACTGGGAAAAGGCATATGATTGA 3972 0.4625 MAKCEGYKVGGEARATPTEHPSLVAVNVQVSRQLRCDFLFTNRQTLGLALFFNLSCKLLVTDSQTSLSFFTNRQTLGLALFLNLSRTYRFDRRNSLSTYSGMEHTLDTSQRQENPRSTARKEVTKIQSPFLFGNRTRSKRRGKKLTIGCDFYHQTSWSISTGSADTSSRCWAAREMTSQVRIERRDRSRFPAQNARREWVPRGTTGAVVESSPSCINSEQNVQHAGFVQQEIPQRSNISSRRHSGLNSTQNEDHGGGLNHNVSQQEKRQRSNYSPRSLSLEQNVDHSEGLLHTISQHTSQQRSNHGLRGSAGQPVNQRREREKEKVTGANQAENIWKDPNLPQLVHEIQEKLMKGTIECMICYDMVRRSAPVWSCSSCYSIFHLNCIKKWAKAPTSVDLSAEKNQGFNWRCPGCQSVQLMSSKEIRYLCFCGKRPDPPSDLYLTPHSCGEPCGKQLEKMAVAGVSKEDLCPHNCVLQCHPGPCPPCKAFAPARLCPCGKKTITTRCSDRQSVLTCGQRCDKLLECGRHRCKQICHVGPCDNCEVPINASCFCQKKAEMILCGEMVVKGDIKAEDGVFSCDSTCCKKLDCGNHICVETCHPGSCGVCNLLPSQLKSCYCGKTSLKEERKSCLDPIPTCSQTCGKPLSCGIHHCGDVCHAGDCQPCMVQVSQKCRCGSTSRDVACYKTTMENEKYSCDRPCGQKKNCGRHRCSERCCPLSNPHNNWNGDWNPHVCSMTCGKKLRCGQHACESLCHSGHCPPCLETIFGDLTCACGRTSIPPPLPCSTPPPSCQLPCSAPQPCGHPASHSCHFGDCPPCSMPVAKECIGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHACGRICHQPPCDVVVNSENGLRASCGQTCGAPRRDCRHTCKAPCHPSAPCPDMRCDFPVTITCSCGRITATVPCGTGGSIGNVSIDTVYEVSVIQKLPVPLQPIESNGKKIPLGQRRLTCDDDCARLVRKTVLAEAFDISTPNLNALHFGDSAASELIADLYRRDPKWVLSVEERCKYLVLGKVRGITTGVKVHVFCPMLKEKRDAVRIIAEWWKLAVNAAGWEPKGFVVVHVTPKSKPPLRMLGVKGTSTVNSPHAPSFDPVVDMDPRLVVSFLDLPREAEISALVLRFGGECELLWLNDRNALAVFHDPARAATAMRRLDHGSVYHGAVVFSHAGTSAAALATNVWGGPALKGNPWKKAVIQEASWKEDAWGEEDWSSGSVDVQPSVWKKEAPVVASLNRWSVLAPESTLSSHVSTLKAESPVKHAANHTVSPYAGTSSTTVQLRENVSETETSEVVEDWEKAYD* 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00134 1323 CDD NF-X1-zinc-finger 448 508 - -
Pte16g00134 1323 CDD RING-CH-C4HC3_NFX1-like 357 415 - -
Pte16g00134 1323 MobiDBLite consensus disorder prediction 296 311 - -
Pte16g00134 1323 CDD NF-X1-zinc-finger 637 685 - -
Pte16g00134 1323 ProSiteProfiles Zinc finger PHD-type profile. 356 417 IPR019787 -
Pte16g00134 1323 MobiDBLite consensus disorder prediction 184 216 - -
Pte16g00134 1323 CDD NF-X1-zinc-finger 790 838 - -
Pte16g00134 1323 CDD NF-X1-zinc-finger 733 776 - -
Pte16g00134 1323 SUPERFAMILY RING/U-box 348 418 - -
Pte16g00134 1323 SMART znfxneu3 470 488 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 SMART znfxneu3 525 544 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 SMART znfxneu3 647 666 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 SMART znfxneu3 589 608 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 SMART znfxneu3 705 735 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 SMART znfxneu3 800 818 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 SMART znfxneu3 892 913 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 SMART znfxneu3 743 762 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 SMART znfxneu3 853 883 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 CDD NF-X1-zinc-finger 515 563 - -
Pte16g00134 1323 CDD NF-X1-zinc-finger 579 622 - -
Pte16g00134 1323 MobiDBLite consensus disorder prediction 296 334 - -
Pte16g00134 1323 MobiDBLite consensus disorder prediction 232 280 - -
Pte16g00134 1323 MobiDBLite consensus disorder prediction 1288 1323 - -
Pte16g00134 1323 ProSiteProfiles Zinc finger RING-type profile. 359 415 IPR001841 -
Pte16g00134 1323 MobiDBLite consensus disorder prediction 101 121 - -
Pte16g00134 1323 Pfam NF-X1 type zinc finger 705 716 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 Pfam NF-X1 type zinc finger 853 868 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 Pfam NF-X1 type zinc finger 589 606 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 Pfam NF-X1 type zinc finger 885 911 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 Pfam NF-X1 type zinc finger 800 817 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 Pfam NF-X1 type zinc finger 743 760 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 Pfam NF-X1 type zinc finger 472 487 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 Pfam NF-X1 type zinc finger 525 542 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 Pfam NF-X1 type zinc finger 647 664 IPR000967 GO:0005634|GO:0008270
Pte16g00134 1323 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 206 1232 IPR034078 GO:0003700
Pte16g00134 1323 MobiDBLite consensus disorder prediction 1289 1308 - -
Pte16g00134 1323 MobiDBLite consensus disorder prediction 1309 1323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00134 Pte-Chr16 1483951 1492725 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Pte16g00134 zf-NF-X1 55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00134 K12236 - zju:107435131 1724.52