Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00131 ATGGAGAGAGATTTCTTGGGTTTGGGTACTCAAAGAAGTTCAATTACTGTGAAAGAGGAAGCACATGATGAGTCAAAGGTTTCAGTGATGAGGAATTCAGGGATGCAGTGGTCATTCTCGAACAAGGTTTCTGCTGTTCCTCAATTCCTGTCGTTCAAAGCTAATCAAGAAGATAGGTCCAGGAAGAATTCTCTTGATGCGCTTCCTCCGCATGGATATATGACCATATCAACTGGTGATGCTCTTGATTCTGACCAGAAACCCCTTTCTGGTACACTCCAGAAAAATGTTGTTATCAGTGAATATGTGGGGAGCCAATGTGGAATGACAATCTATCCCGTACAACGGCTTGATGTACATCCAGTTCGTTCCCAAGAAGCACGAGCTAGTCCTTTCTCCAATCAATCAAATCAAACAAGTCATATTGGCCTCAGTAATTCCGTTGTCCAATCTTGTTTTCCATCCAATGGGCAGAATGTGGTAAACGCCACCATCAAGGCACAACCTCTTGGGGTTCTTCCACCTGCAACCCCTGTATCTGTTCTTCCCTCTAGGGGTCCCATTGTGGGAACAACTGATCTAAGGAGCGCTTCTCAATCTGCTGGTGCTCCTACACAGCTGACGATCTTTTATGGCGGTTCAGTGTGTGTTTACGATGACATCTCTCCTGAGAAGGCTCAGGCTATTATGTTACTAGCTGGAAACGGATCTCCTCCAACTCAGAACAAGATTATTTCCACGGCTGAAATGAAGCCATTGGTTCCAATGCCCTCAAAGGGTGATTGCTTTATCATAAGCCAATCCTGTTCCTCTTCCCTTCCAAGTCGTTTGTCGATTTCCTCCAATGCTGGTTCTCAATCCATGGGGGTTTCTTTTACTTTCAATGATCCACCTAAAGGGAAATCACTTTGCTCTTCTTCAGCAAACATTAAGCAGACAGAGTCTCCTAATAGAGTCAGTTCTGTAGGAGCTGAATCTGCTTCATTGGCTCCTTCAGTAGCTTTGCCTCAGGCACGTAAAGCATCCCTGACTCGTTTTTTAGAGAAACGCAAGGAAAGGGTTATAAGTACGTCGCCATACCCTTTGAACAAAAGGCCACTTGATTGCAGCACAACTGGATCTGAAAGCAGTAATTTACCTGCCAATTCTGTCGGTTCGTGCCCCCTTCCGGCTGTCAATTAG 1182 0.4509 MERDFLGLGTQRSSITVKEEAHDESKVSVMRNSGMQWSFSNKVSAVPQFLSFKANQEDRSRKNSLDALPPHGYMTISTGDALDSDQKPLSGTLQKNVVISEYVGSQCGMTIYPVQRLDVHPVRSQEARASPFSNQSNQTSHIGLSNSVVQSCFPSNGQNVVNATIKAQPLGVLPPATPVSVLPSRGPIVGTTDLRSASQSAGAPTQLTIFYGGSVCVYDDISPEKAQAIMLLAGNGSPPTQNKIISTAEMKPLVPMPSKGDCFIISQSCSSSLPSRLSISSNAGSQSMGVSFTFNDPPKGKSLCSSSANIKQTESPNRVSSVGAESASLAPSVALPQARKASLTRFLEKRKERVISTSPYPLNKRPLDCSTTGSESSNLPANSVGSCPLPAVN* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00131 393 MobiDBLite consensus disorder prediction 357 393 - -
Pte16g00131 393 MobiDBLite consensus disorder prediction 303 323 - -
Pte16g00131 393 Pfam tify domain 203 234 IPR010399 -
Pte16g00131 393 SMART tify_2 200 235 IPR010399 -
Pte16g00131 393 MobiDBLite consensus disorder prediction 363 384 - -
Pte16g00131 393 ProSiteProfiles Tify domain profile. 200 235 IPR010399 -
Pte16g00131 393 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 27 372 IPR040390 -
Pte16g00131 393 Pfam Jas motif 336 360 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00131 Pte-Chr16 1463610 1467293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00131 35 375 Tify Gene Family AT3G17860 41.499 1.51e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte16g00131 tify 9.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00131 K13464 - qsu:112010494 385.956