Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00130 ATGTCGAGGTTGGGGCCGGAAGCTGCAAATAGGAGCCTTGAAAGCTTGTTAGACATGGACAAATCAAAGGCTAAGAAACCTGAGGTTGCAGTTAGACCCCAGAAGTCTGTTCCTGGGAGTGGTCTTGAATTCAACAACCTATCTTACAGCGTTATCAAGAAACAGAAGAAGGATGGGGTTTGGATTAACAAAGAAGCTTATCTTCTCAATGACATCTCTGGCCAAGCAATGAGAGGGCAAGTTATGGCCATCATGGGGCCAAGTGGTGCTGGAAAATCCACATTTCTTGATGCTCTGGCTGGTAGGATTGCACAAGGAAGCCTCGAAGGATCAGTCAGAATGGATGGCAAGCCAGTCACTACAAGTTACATGAAAATGATATCATCTTATGTGATGCAAGATGACCAGCTCTTCCCTATGCTGACAGTGTTCGAGACATTAATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCACTTTCCAGAGAGGAGAAGAAGAAGAGAGTTTATCAGCTCCTTGGTCAACTTGGTTTGGAGAGTGCAGCACATACGTATATAGGAGACGAAGGAAGGAGAGGAGTGTCAGGTGGCGAGAGAAGAAGGGTATCTATAGGAATTGACATCATTCACAAACCATCCCTGCTTTTCCTTGATGAACCAACCTCAGGTCTTGATTCCACTAGTGCTTACAGTGTGGTAGAAAAAGTTAAGGACATTGCTCAAGGAGGGAGCATTGTCCTCATGACCATTCATCAACCTTCATACCGAATTCAAATGCTCCTCGATCGCATCACTATCCTTGCAAGGGGAAGACTAGTGTACCTGGGAACCCCACAAGAACTTCCTGATTACCTCTCAGGGTTTGGGAGACCTGTACCAGATGGAGAGAACAGCTTGGAATATCTGCTTGATGTGATAAAAGAATATGACCAATCAACGGTTGGTTTAGAACCCCTTGTAGCTTACCAACGAGATGGAATCAAACCAGATGAAGTTGCCATGACCCCAGTTCCAAAGACACATAGAACACCCCACAAAAGGACCTCAGTATCTAGAGATTCAAGACACATGATTAGTCTGCGTAGTCAAGCTTTCTCTTCTTCCAATAATAGGACACAACTGGACTCTCATCGGTTTGATAACGATGACGAAGACAATGATGATGATGAAGATTTTGATAACTCTCTTGAAAGGAGAAGTGCTTTATTAACACCAATGACTATGCAAAGTGGAGTCTATAACCCACGATTGGCTTCCCAATTCTACAAAGATTTCTCTGTCTGGATCTACCATGGTGTAGTGAGAACCCCAGCTCGTCCCAAACCCTCCTGGACTCCTGCCAGAACTCCAGCTAGGACGCCCGTGAAAACACCATGGGATCAAGGTTCAACACAGTTCAGAACACCTATGAATAATAATCATCCTCAATCTGCTGTGTATAGTACATCAATAGATTCCTATGCACCTTCTTTTGAGGAACATGAGAATGAGGAAGTGCTTGATCGACATGATCTTGGACCAAAATTCGCCAACCCCTGGCTGCGTGAGGTTGCAGTCCTGTCATGGAGGACGGCACTGAATGTGATTCGTACCCCAGAACTCTTCCTCTCCCGTGAGATTGTACTAATCGTCATGGCAATTGTACTGTCAACTCTTTTCAAAAATCTGGGGCATCTTACTTTCAAAGACATCAACAGGCTTCTGAACTTCTACATTTTTGCAGTGTGTCTTGTTTTCTTTTCCTCCAATGATGCTGTCCCAACTTTCATCCAGGAGAGGTTCATTTTCATCAGGGAGACTTCTCACAATGCTTACCGCGCATCTTCTTATGTCATCTCCTCCCTCATTGTTTATCTTCCATTCTTTGCAATTCAAGGTCTTACGTTTGCTGCTATAACCAAATTCATGCTTCACCTCAAGAGCAATCTTCTCAACTTCTGGATGATCCTGTTTGCCTCACTCATTACTACTAATGCCTATGTGATGCTTGTCAGTGCTCTGGTACCAAGTTACATCACAGGTTATGCTGTTGTCATTGCCACAACAGCTCTTTTCTTTCTAACATGCGGATTCTTCCTGAAGAGAACTCAGATTCCTATCTACTGGCAATGGCTTCACTACATATCTGCAATCAAATACCCTTTTGAGGCACTGCTGACAAATGAATTCAAGAATGATAAGTGTTACACAGGGAATCCACAAGATCTATCACCAGGCCCTCTGGGAGATGTCAAGATAAGTGAGCGGCATAGAAGCTTGGCAGATTTACCAGAAAATTGTTTGATTGGAGAGGATGTCCTAGTTACCATGAATGTTCAGATGGAAAGTGTATGGAAAGACATTGCAATTTTGCTGGCTTGGGGTGTGCTGTACCGGTTGTTTTTCTATGTGGTTCTTAGGTTTTACTCCAAAAACATAAGGAAATGA 2424 0.4377 MSRLGPEAANRSLESLLDMDKSKAKKPEVAVRPQKSVPGSGLEFNNLSYSVIKKQKKDGVWINKEAYLLNDISGQAMRGQVMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRMDGKPVTTSYMKMISSYVMQDDQLFPMLTVFETLMFAAEVRLPPSLSREEKKKRVYQLLGQLGLESAAHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIAQGGSIVLMTIHQPSYRIQMLLDRITILARGRLVYLGTPQELPDYLSGFGRPVPDGENSLEYLLDVIKEYDQSTVGLEPLVAYQRDGIKPDEVAMTPVPKTHRTPHKRTSVSRDSRHMISLRSQAFSSSNNRTQLDSHRFDNDDEDNDDDEDFDNSLERRSALLTPMTMQSGVYNPRLASQFYKDFSVWIYHGVVRTPARPKPSWTPARTPARTPVKTPWDQGSTQFRTPMNNNHPQSAVYSTSIDSYAPSFEEHENEEVLDRHDLGPKFANPWLREVAVLSWRTALNVIRTPELFLSREIVLIVMAIVLSTLFKNLGHLTFKDINRLLNFYIFAVCLVFFSSNDAVPTFIQERFIFIRETSHNAYRASSYVISSLIVYLPFFAIQGLTFAAITKFMLHLKSNLLNFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPIYWQWLHYISAIKYPFEALLTNEFKNDKCYTGNPQDLSPGPLGDVKISERHRSLADLPENCLIGEDVLVTMNVQMESVWKDIAILLAWGVLYRLFFYVVLRFYSKNIRK* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00130 807 Gene3D - 40 284 IPR027417 -
Pte16g00130 807 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524|GO:0016887
Pte16g00130 807 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Pte16g00130 807 MobiDBLite consensus disorder prediction 1 29 - -
Pte16g00130 807 FunFam ABC transporter G family member 6 57 284 - -
Pte16g00130 807 CDD ABCG_EPDR 39 275 - -
Pte16g00130 807 MobiDBLite consensus disorder prediction 438 458 - -
Pte16g00130 807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 284 IPR027417 -
Pte16g00130 807 SMART AAA_5 78 278 IPR003593 GO:0016887
Pte16g00130 807 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 793 - -
Pte16g00130 807 Pfam ABC-2 type transporter 250 307 IPR043926 GO:0140359
Pte16g00130 807 MobiDBLite consensus disorder prediction 354 373 - -
Pte16g00130 807 Pfam ABC-2 type transporter 516 722 IPR013525 GO:0016020|GO:0140359
Pte16g00130 807 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Pte16g00130 807 MobiDBLite consensus disorder prediction 14 29 - -
Pte16g00130 807 MobiDBLite consensus disorder prediction 331 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00130 Pte-Chr16 1457526 1460358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00130 68 404 Calmodulin-binding Proteins AT2G36910 24.931 2.78e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00130 K05681 - csin:114284686 1189.1