Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00121 ATGTCTTTACACAGATCAAGAAATAGACCCAAAGTCAGTGTGGAGGGAAGTCCTAGAGAGAGAAATAAGAGAATCTGGCATTCAAATTTAGCCCTACTTCCAAGCAAGTCAAACTGCCTTGCTGATGAGAGTTGCATTTGCTGGGTGGATGGCAAAGTTGTCCAAGATCTTGTGCTCGAGTTGAGAAATGTGGAATGTGGTGAAGTGGAACTCCAGCTGCAATGGATTGATCTTCCTGGTTCCAATTAA 249 0.4337 MSLHRSRNRPKVSVEGSPRERNKRIWHSNLALLPSKSNCLADESCICWVDGKVVQDLVLELRNVECGEVELQLQWIDLPGSN* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00121 82 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 32 81 IPR044562 -
Pte16g00121 82 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00121 Pte-Chr16 1350051 1359435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00121 34 80 C2H2 Transcription Factor Family AT1G70790 59.574 4.26e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00121 - - cave:132184362 92.8189