Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00119 ATGTGGATGGTGGGTTACAAAGATGGTGTAGAGTTGAACATGTCTGCTGATTCGTTTCACGGACGGAAACTTCGACCACTTATTCCGAGGCCCATGACTTCCAACAATAGTGCTTCTCCTACAACAACTCCTTCTTTGGATATCTTCCCCGGCGCTGATTTTTTTTCACATTATCATAATATGAGTGTGACTGAACAGGGCAAGATGAGAGATCATCAGTTGAACAATCAACCAGTGGCAGTGAGCTCTTCCAGGTGGAATCCAACACCAGAGCAGCTGAGTGCTCTTGAGGAACTATACCACAAAGGAACTAGGACTCCATCAGCCGAGCAAATTCAACATATCACTGCACAGCTTCGTAGGTTTGGCAAGATTGAAGGGAAGAATGTGTTTTATTGGTTTCAGAATCACAAAGCAAGAGAAAGACAGAAGCGACGCCGTCAACTGGAATCATCTGCTGATCAGGGAAATCAGCGGGACAGTTTGGACAACATCACAGAGAAGAAATACTTGACTGGTGGGGGAAATAGGACAGTTTTTGAAGAACAAAACAAAAACAACTGGGTGCCCCCTACAAACTGCAGTAGTCGAGAACAGGAATCTTTTTCAACACAAAGGACAGCAAAAGTAGATGTGGCAGAGTGTAGAAGCGATGGATGGACTCAATTCGATGAAGGAGAATTACAACAAAGAAGAAACTTTGCTGAAAGGAATGCCACGTTGCAGATGATGCAGTTGTCTTGTCCTCATCGTCCTCCTCCTCCTTCTGTTCCTGCCAACCACCACTTCATAAACACACCTGCTCTTGCTGCTGCTACGTCTTGCTCATCCTCCCTTACTATTACTACAACCACAGTAACCACAGCAAGGACGATGGACCCAAAGCTCATTAAGTCAGAACATGATCTCAGTTTCTTCAAAGCACCCCACAGAGACAACATTGGTGTTATCCGCCTAAACTGTTTCAACGACATTATTGACCAAGATAACTGTGTGGAATCCCAAACACTTCAACTTTTCCCACTTAGGAGTGAAGAAACTGATGACAACAAAGACAGCAGTGTGCCATCAACTTCAGCTGCATTAATGAATTCTAACTTTAACGGAAACCCTAACCAGTTCTACGAGTTTCTCCCTCTAAAAAATTAA 1149 0.4386 MWMVGYKDGVELNMSADSFHGRKLRPLIPRPMTSNNSASPTTTPSLDIFPGADFFSHYHNMSVTEQGKMRDHQLNNQPVAVSSSRWNPTPEQLSALEELYHKGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQLESSADQGNQRDSLDNITEKKYLTGGGNRTVFEEQNKNNWVPPTNCSSREQESFSTQRTAKVDVAECRSDGWTQFDEGELQQRRNFAERNATLQMMQLSCPHRPPPPSVPANHHFINTPALAAATSCSSSLTITTTTVTTARTMDPKLIKSEHDLSFFKAPHRDNIGVIRLNCFNDIIDQDNCVESQTLQLFPLRSEETDDNKDSSVPSTSAALMNSNFNGNPNQFYEFLPLKN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00119 382 MobiDBLite consensus disorder prediction 343 363 - -
Pte16g00119 382 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Pte16g00119 382 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 70 377 IPR044555 GO:0003700|GO:0099402
Pte16g00119 382 Pfam Homeodomain 83 143 IPR001356 GO:0003677
Pte16g00119 382 SUPERFAMILY Homeodomain-like 83 148 IPR009057 -
Pte16g00119 382 FunFam WUSCHEL-related homeobox 4 83 150 - -
Pte16g00119 382 CDD homeodomain 85 145 IPR001356 GO:0003677
Pte16g00119 382 MobiDBLite consensus disorder prediction 142 170 - -
Pte16g00119 382 Gene3D - 75 144 - -
Pte16g00119 382 SMART HOX_1 81 148 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00119 Pte-Chr16 1313519 1316071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00119 1 383 Wox Gene Family AT3G18010 35.266 2.70e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte16g00119 Homeodomain 5.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00119 - - qsa:O6P43_005181 402.134