Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00118 ATGCTGTCTTTCTGTCTATGTGTTATTTCTTGTGTTCACTCTTGTCAGCATGAGGAAGAACAAGGCCATGATAAAATCCAAGCTCTCACCTATAAGTTAGTAGCTTTTGGTGCAATACTTAGGGTTGGAGGAATTGGAATTTGGATTCCAATGCTTGGAAAGGCAATCCCTGCAATAAGTTCTGAAAAAAATGCCTTCTTCATGATTAAGGCCTTTGCAGCAGGTGTGATATTAGCAACTGGCTGCATCCATATCCTCCCTGATGCTTTTCAGAACTTGTCTTCTTCATGTTTGGATCAACCATGGCAGAACTTCCCCTTCACAAGTTTGATCGCTATGGTGTCTGCTGTGGTGACTCTAATGATTGAGAGCTACGCAACTTTATTTTACAACAAAAGCCACTCTCACAAGTCTCAGTCTGAAATAAACCCAGAGAAACCACAATTTCCAGAACATAAAGGAGATGTTCAGAAAGTTGAGTTTAAGGATCTAGAAAAACTGCAGCATAAACATGAAGAACTTGTTCATGCTCATATCCATGGTCATTCTCATGGTCCAGATTCTTCATAA 570 0.4 MLSFCLCVISCVHSCQHEEEQGHDKIQALTYKLVAFGAILRVGGIGIWIPMLGKAIPAISSEKNAFFMIKAFAAGVILATGCIHILPDAFQNLSSSCLDQPWQNFPFTSLIAMVSAVVTLMIESYATLFYNKSHSHKSQSEINPEKPQFPEHKGDVQKVEFKDLEKLQHKHEELVHAHIHGHSHGPDSS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00118 189 Pfam ZIP Zinc transporter 30 181 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pte16g00118 189 PANTHER ZINC/IRON TRANSPORTER 28 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00118 Pte-Chr16 1302568 1303280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00118 1 185 Inorganic Solute Cotransporters AT3G12750 40.306 2.90e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00118 K14709 - qsu:112037222 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00118 16 1302568 1303280 Pte16g00118 16 1302568 1303280 RCT