Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00107 ATGGGGGGTGGAGCTACACTGGTGGACGGTATTCGTCGTTGGTTTCATCGTCGGTCTTCTTCTCTTGTTTCTCATACTTCTCTTGACAACCACAACAACGACAGCAGAAATTCTAATGCTGAAAACGTTGGTCCTGACAGTAACAGCAACAAGAAAAATTACATTGAGAGGGTACAAGGGGAGCTCACAATTATTGAGGAAGAATTTGTTGTCATTGGATTGAAGCGTCTTAGAGTGCCTAATACAGCACAATTTGTACCTGCTCTCATGGATCCTCACAAGAAGGGTGAGCACGAAACTGATTTTTTTACAGAATATGGGGAGGCGAGTCGATATCAGATCCAAGAAGTCGTTGGGAAAGGAAGTTATGGTGTTGTTGGCGCAGCAGTTGATACCCATACTGGGGAGAAAGTTGCAATTAAGAAAATCAGTGATGTATTTGAACATGTCTCTGATGCTACGCGAATCTTAAGAGAAATCAAGCTCCTTCGTTTGCTTCGCCATCCTGATATTGTAGAGATTAAGCATATTATGCTTCCTCCATCACGACGAGAGTTTAGAGATATCTATGTTGTGTTTGAGCTTATGGAATCAGACCTTCATCAAGTAATTAAGGCCAATGATGATCTTTCTCCTGAACACTTTCAGTTTTTCTTGTACCAGCTTCTTCGTGGTTTGAAGTATATACATTCAGCAAATGTGTTTCACCGTGACTTGAAGCCAAAAAATATTCTTGCTAATGCTGACTGCAAACTAAAGATATGTGATTTTGGGCTTGCTCGAGTTTCTTTTAACGAAGCTCCATCAGCTATATTCTGGACTGATTATGTTGCAACTCGATGGTATCGTGCGCCTGAGTTATGCGGTTCATTCTTCTCAAAATACACCCCTGCAATTGATATATGGAGCATTGGATGCATATTCGCGGAATTGCTTATGGGAAAACCTCTGTTCCCTGGTAAAAACGTTGTGCACCAATTAGATCTCATGACAGATTTGCTTGGTACTCCTCCCCCTGAAGCCATTTCAAGGATTCGTAATGAAAAAGCTAGAAGGTACCTTAGCAACATGCGGAAAAAACCACCAGTTCCATTTACACATAAGTTTCCAGGTGCTGATCCTTTGGCTCTCCGTTTGTTAGAGCGCCTGCTTGCATTTGATCCCAAAGATCGCCCGTCAGCCGAAGAGGCATTATCTGATCCTTACTTCAATGGATTGGCAAACAAAGATCGTGAACCATCAACACGACCTATTTCAAAACTTGAGTTTGAATTTGAGAGGAGAAAATTAACTAAAGATGACGTTAGGGAGTTGATCTATCGGGAGATCCTAGAATATCATCCTCAAATGCTGCAAGAGTATCTTCGAGGTGGAGAGCAGACAAGTTTCATGTACCCAAGTGGGGTTGATCGTTTTAAGAGACAATTTGCACATCTTGAGGAGGGTGGTAAAGGTGAACGAGGCCATCCAGTCCTTAGGCAGAATACATCCTTACCAAGAGAACGAGTTTGTGTGTCAAAGGAACAGAGCGATGAAAACGAAGTTGAAAAGAAAACTACAGATTCAACTCTTGACAATCCTCGTGGGAAAGATGGTACAGATGCAACAAATGCAGATACACAAAATGGACAAAGCAAGCCAAACTGCAGTGCACGTAGCCTATTAAAGAGTGCTAGCATTAGTGGTTCAAAGTGTATAGGCGAGCAACCGAAAAATACCGCAGAGGTAACAGCTATTTCATCCCGGAACATGTTTCGTGCTGATTGTCACAATACTAGAGGGAATACTAAAATGAACTTAGATGTCATTTGGTATCGGAATTGA 1824 0.4189 MGGGATLVDGIRRWFHRRSSSLVSHTSLDNHNNDSRNSNAENVGPDSNSNKKNYIERVQGELTIIEEEFVVIGLKRLRVPNTAQFVPALMDPHKKGEHETDFFTEYGEASRYQIQEVVGKGSYGVVGAAVDTHTGEKVAIKKISDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLSPEHFQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLMGKPLFPGKNVVHQLDLMTDLLGTPPPEAISRIRNEKARRYLSNMRKKPPVPFTHKFPGADPLALRLLERLLAFDPKDRPSAEEALSDPYFNGLANKDREPSTRPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEEGGKGERGHPVLRQNTSLPRERVCVSKEQSDENEVEKKTTDSTLDNPRGKDGTDATNADTQNGQSKPNCSARSLLKSASISGSKCIGEQPKNTAEVTAISSRNMFRADCHNTRGNTKMNLDVIWYRN* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00107 607 MobiDBLite consensus disorder prediction 529 551 - -
Pte16g00107 607 SMART serkin_6 112 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00107 607 Gene3D Transferase(Phosphotransferase) domain 1 198 426 - -
Pte16g00107 607 MobiDBLite consensus disorder prediction 504 528 - -
Pte16g00107 607 ProSitePatterns Protein kinases ATP-binding region signature. 118 142 IPR017441 GO:0005524
Pte16g00107 607 Gene3D Phosphorylase Kinase; domain 1 128 449 - -
Pte16g00107 607 MobiDBLite consensus disorder prediction 480 551 - -
Pte16g00107 607 MobiDBLite consensus disorder prediction 23 51 - -
Pte16g00107 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 111 455 - -
Pte16g00107 607 ProSitePatterns MAP kinase signature. 147 250 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pte16g00107 607 Pfam Protein kinase domain 112 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00107 607 FunFam Mitogen-activated protein kinase 427 449 - -
Pte16g00107 607 MobiDBLite consensus disorder prediction 392 415 - -
Pte16g00107 607 FunFam Mitogen-activated protein kinase 198 426 - -
Pte16g00107 607 SUPERFAMILY Protein kinase-like (PK-like) 108 408 IPR011009 -
Pte16g00107 607 ProSiteProfiles Protein kinase domain profile. 112 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00107 607 CDD STKc_TDY_MAPK 111 448 - -
Pte16g00107 607 FunFam Mitogen-activated protein kinase 101 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00107 Pte-Chr16 1223711 1229051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00107 1 583 MAP Kinase Gene Family AT1G73670 69.128 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pte16g00107 Pkinase 3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00107 - - qsa:O6P43_008492 865.529