Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00096 ATGGATATTGAGGAGGAGATCCGTGCTCTGCAGCTTGACTCAGCAGAAGAGAATAACGGGGTGGCAAACCAAGAAGACACAAAGCCAGAAGGCGATGCTCCAGATAAGATGGATGAAGATCCTAAAGATGAAGATCATGAACAGGAGATCAAGGATGAAAAAGATGCTGATAAGGAGATTTCTGTTCAAGAGGAGGCAGAACATGAGGAGGAAGAGAAGCCTAAGAAGCGACACTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGAAAGTCCACTATTGGAGGTCAGATACTTTTCTTAAGTGGTCAGGTTGATGAACGTACAATCCAGAAATATGAGAAGGAAGCAAAGGATAAAAGCAGGGAAAGCTGGTATATGGCATATATTATGGACACTAATGAAGAAGAGAGAGTCAAGGGAATCACAGTTGAAGTTGGAAGGGCACATTTTGAAACAGAAACAACAAGGTTCACAATTTTGGATGCGCCTGGTCATAAAAGTTATGTCCCAAACATGATCAGTGGTGCATCACAAGCTGATATTGGTGTACTGGTAATTTCTGCTCGTAAAGGGGAATTCGAAACTGGATATGAGAGGGGTGGACAGACCCGCGAACATGTTCAACTTGCAAAAACATTGGGAGTGTCTAAGCTGCTTGTTGTTGTCAACAAAATGGATGAGCCTACTGTTCAATGGTCCAAAGAAAGGTATGACGAGATTGAGTCAAAAATGATACCTTTCCTGAAATCATCAGGCTACAACGTAAAGAAAGATGTACAGTTCTTGCCCATCTCTGGGCTGATTGGTGCGAACTTGAAAACTAGAATGGATAAAAGCATTTGCCCATGGTGGGATGGTCCCTGTCTTTTTGAAGCACTTGATGCCGCCGAAGTTACTCCTCGTGATCCTGATGGTCCTTTCAGGATGCCTATAATAGACAAATTCAAAGACATGGGTACTATGGTCATGGGAAAATCAGAATCTGGCAGCATAAGTGAGGGGGACTCACTGTTGGTCATGCCCAATAAGGTACCTGTCAAAGTTCTTGCCATATTTGTTGATGAAGATAGAGTTAAACGTGCTGGGCCTGGTGAAAATCTACGAGTTAGATTATCTGGCATTGAAGAATCAGACATTCTGTCTGGTTTTGTTTTGTCCAGTGTGGCAAACTCAGTGCCAGCTGTTACAGAATTTGTTGCTCACTTGCGGATTCTTGAGTTACTGGATAATGCTATATTCACTGCTGGCTATAAAGCTGTTTTGCATATTCACTCCGTTGTTGAGGAATGTGAGATTGTAGAGTTGTTACAACAAATTGACCCAAAAACGATGAAGCCTATGAAGAAGAAGGTTCTTTTTGTGAAGAACGGTGCTCTTGTCGTATGCCGCATTCAGGTTAATAACTTGATTTGCGTTGAGAAGTTTTCCAATTTTGCACAACTAGGAAGATTCACTCTTCGTACTGAAGGAAAAACAGTTGCAATCGGAAAAATTACTGAAATATGA 1509 0.4182 MDIEEEIRALQLDSAEENNGVANQEDTKPEGDAPDKMDEDPKDEDHEQEIKDEKDADKEISVQEEAEHEEEEKPKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGITVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVQWSKERYDEIESKMIPFLKSSGYNVKKDVQFLPISGLIGANLKTRMDKSICPWWDGPCLFEALDAAEVTPRDPDGPFRMPIIDKFKDMGTMVMGKSESGSISEGDSLLVMPNKVPVKVLAIFVDEDRVKRAGPGENLRVRLSGIEESDILSGFVLSSVANSVPAVTEFVAHLRILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTMKPMKKKVLFVKNGALVVCRIQVNNLICVEKFSNFAQLGRFTLRTEGKTVAIGKITEI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00096 502 CDD eRF3_II 307 388 - -
Pte16g00096 502 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 304 390 - -
Pte16g00096 502 CDD EF1_alpha 80 299 - -
Pte16g00096 502 SUPERFAMILY Translation proteins 302 391 IPR009000 -
Pte16g00096 502 CDD eRF3_C_III 394 502 - -
Pte16g00096 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 311 IPR027417 -
Pte16g00096 502 Gene3D Translation factors 395 502 - -
Pte16g00096 502 MobiDBLite consensus disorder prediction 28 75 - -
Pte16g00096 502 PANTHER TRANSLATION FACTOR 68 502 - -
Pte16g00096 502 Gene3D Translation factors 305 390 - -
Pte16g00096 502 Gene3D - 36 300 IPR027417 -
Pte16g00096 502 PRINTS GTP-binding elongation factor signature 139 147 IPR000795 GO:0003924|GO:0005525
Pte16g00096 502 PRINTS GTP-binding elongation factor signature 159 169 IPR000795 GO:0003924|GO:0005525
Pte16g00096 502 PRINTS GTP-binding elongation factor signature 80 93 IPR000795 GO:0003924|GO:0005525
Pte16g00096 502 PRINTS GTP-binding elongation factor signature 175 186 IPR000795 GO:0003924|GO:0005525
Pte16g00096 502 PRINTS GTP-binding elongation factor signature 219 228 IPR000795 GO:0003924|GO:0005525
Pte16g00096 502 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 397 502 IPR009001 -
Pte16g00096 502 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 76 302 IPR000795 GO:0003924|GO:0005525
Pte16g00096 502 FunFam Putative translation elongation/initiation factor family protein 394 502 - -
Pte16g00096 502 MobiDBLite consensus disorder prediction 1 75 - -
Pte16g00096 502 Pfam Elongation factor Tu C-terminal domain 393 502 IPR004160 -
Pte16g00096 502 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 132 147 IPR031157 -
Pte16g00096 502 Pfam Elongation factor Tu GTP binding domain 76 278 IPR000795 GO:0003924|GO:0005525
Pte16g00096 502 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 56 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00096 Pte-Chr16 1115211 1123727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00096 76 502 Eukaryotic Initiation Factors Gene Family AT5G60390 36.279 1.25e-89 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00096 K03267 - gmx:100784412 836.639