Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00085 ATGTCCAAAATACCTTCACTCCGCCTACTCATCATAAACCGTCTGTCCCCAATAGGAGAAAGAAAGATTGTGATTGATATCATTGTATGGATGGAGATGAGAAAAGTGCAGAAAATGGAAATGAGAAAAAGTAACTTCTCATCTGTAATTGTGAGTGGTAAAGAGGATTATACGAAAATACCAAAGATAGATATTCAGTATAAAAATCGAATTGATACAGTGAAGAAGAAGTTCAAGTCGGAGAAAGCAAAGGTTGCAGCTGGTAGTGGACCTAGCAAATGGTTGTCCTTTGAGAAATTGGATAATTTGATTACTTCATCTGTAAAGATTGTTGCTTCAGTAGGAAATCCAACGATGAATAACAATTTCCAGACAACCCATAAAGTCCCTCTGAGAATTTCAGTTGGGATTCATCAGATGGAGTATCCCTCATCAGTTTCCACCGATAGCTTTCCGTCGGATACTTATGACAGGAAGAGGCCAAAGTTAATGGTTCAAAAGGGAGACATGAATTCAAATACTGATGTTGGTGTTGGTGATAGGGTTGCCATTGGTGACAGGGAAAAGGAACGCACAAAAAGATAA 585 0.3846 MSKIPSLRLLIINRLSPIGERKIVIDIIVWMEMRKVQKMEMRKSNFSSVIVSGKEDYTKIPKIDIQYKNRIDTVKKKFKSEKAKVAAGSGPSKWLSFEKLDNLITSSVKIVASVGNPTMNNNFQTTHKVPLRISVGIHQMEYPSSVSTDSFPSDTYDRKRPKLMVQKGDMNSNTDVGVGDRVAIGDREKERTKR* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00085 194 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 51 152 IPR044823 -
Pte16g00085 194 MobiDBLite consensus disorder prediction 164 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00085 Pte-Chr16 1018422 1020795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00085 20 158 Trihelix Transcription Factor Family AT3G14180 38.028 4.29e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00085 - - qsa:O6P43_027506 118.627