Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00083 ATGAGGCTTCCGGCAATCATTTGCTCATGCTGGAAGAAGCGGGATAGAGCTGGAAGAGAAACCAACGGTCACGGGAACGCTGATGAAGCTGATTCGTGCGACATTTTCTTTGATCTCAACACTCTGCAGCTAGCTACCAACTTCTTCTCTGAGCTCAACAAATTGGGTCACGGTGGGTTCGGTCCCGTCTTCAAGGGATTGATACCAAATGGTCAACAAGTAGCTGTTAAGAAACTTTCACTTGATTCAAGACAGGGAGTTAGAGAATTCACTAATGAGGTGAAAGTGCTACTGAGGATTCAGCACAAGAATTTGGTTACATTATTAGGGTGTTGTGTTGAAGGACCTGAGAAAATGCTAGTTTATGAGTATCTGCCAAACAGAAGCCTTGATAATGTCTTATTTGACAAAAATAAATCATCATGCTTGGATTGGAGGGCAAGGTTTCAGATTATCACTGGAGTAGCTAGAGGACTTCTTTACCTACATGAAGAGGCCCCTGAAAGAATAATTCATAGAGACATCAAAGCAAGTAACATTTTGCTGGATGAGAAATTAAATCCAAAAATTTCAGACTTTGGCTTGGCCAGACTGTTTCCCGGAGATGGTACCCACACGAATACATTCAGGATTTCTGGTACTTATGGGTACATGGCCCCTGAATATGCAGTTCATGGATATTTATCGGTGAAAACAGACGTCTTCAGTTATGGAGTGTTGGTACTAGAAATAGTTGGTGGAAGAAAAAATCATGATGACAGGCTCGGTGCTGAACAGTCAGACCTTTTAAGCTATACATGGAACATGTATCAAAGCGGGAACCTCTTGGAATTGGTTGACTCACGCCTTCAAAAATACAATCCAGATGAGGCAGCTATGTGCATACAACTAGGTCTGCTATGCTGTCAAGCTGCAGTCCCGGATAGGCCAGACATGAATTCTGTTCAGCTCATCCTATCCAGCGATTCATTTACTTTGCCATCACCTGGTAAACCAGGACTTCTTGGTCGTGGAGGAAGGTGGACAACAAGCACAACTTCGGGCTTTACCAAATCCAGTGCCACTGCTAGTAGTGCATTTACCAAGGTATCTGCAGGCAGTAGTTTTATTGAAGACAATTCTAGAAATTCTATCTCTTTTTCATCTTTTGATGAAGGTAGATGA 1164 0.4261 MRLPAIICSCWKKRDRAGRETNGHGNADEADSCDIFFDLNTLQLATNFFSELNKLGHGGFGPVFKGLIPNGQQVAVKKLSLDSRQGVREFTNEVKVLLRIQHKNLVTLLGCCVEGPEKMLVYEYLPNRSLDNVLFDKNKSSCLDWRARFQIITGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGDGTHTNTFRISGTYGYMAPEYAVHGYLSVKTDVFSYGVLVLEIVGGRKNHDDRLGAEQSDLLSYTWNMYQSGNLLELVDSRLQKYNPDEAAMCIQLGLLCCQAAVPDRPDMNSVQLILSSDSFTLPSPGKPGLLGRGGRWTTSTTSGFTKSSATASSAFTKVSAGSSFIEDNSRNSISFSSFDEGR* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00083 387 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 354 - -
Pte16g00083 387 FunFam Cysteine-rich receptor-like protein kinase 2 13 124 - -
Pte16g00083 387 SMART serkin_6 49 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00083 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Pte16g00083 387 CDD STKc_IRAK 55 319 - -
Pte16g00083 387 ProSiteProfiles Protein kinase domain profile. 49 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00083 387 FunFam Cysteine-rich receptor-like protein kinase 41 125 325 - -
Pte16g00083 387 Gene3D Transferase(Phosphotransferase) domain 1 125 324 - -
Pte16g00083 387 SUPERFAMILY Protein kinase-like (PK-like) 35 317 IPR011009 -
Pte16g00083 387 Pfam Protein tyrosine and serine/threonine kinase 52 316 IPR001245 GO:0004672|GO:0006468
Pte16g00083 387 Gene3D Phosphorylase Kinase; domain 1 11 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00083 Pte-Chr16 931783 934462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00083 1 370 Receptor kinase-like Gene Family AT4G05200 44.675 1.88e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte16g00083 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00083 - - vri:117904163 557.755