Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00081 ATGTACACTTCAAGGCAGAAAATCAGGAAAGACAACGATGTTGAGCCAACAGAATTTGAAGAATCTGTTGGACAGGCATTGTTTGATCTTGAGAACACAAATCAGGAGCTGAAAAGTGACTTGAAAGACCTGTATATTAATTCAGCACTCCAAGTTGATGTTAGTGGGAGTCGCAAGGCTGTTGTCATCCATGTACCTTATAGATTGAGAAAAGCTTTCAGGAAGATTCATGTCAGGCTTGTAAGAGAGCTTGAGAAGAAATTCAGTGGCAAGGATGTCATTCTGATTGCTACTAGAAGGATAATGAGGCCCCCAAAGAAAGGGTCTGCTGTTCAGCGACCTCGCAGTCGTACTCTAACTGCAGTGCATGAGGCTATGCTGGAAGATGTCGTTTTGCCTGCTGAAATTGTTGGGAAGCGCATTAGATATCGAATTGATGGATCCAAAATAATGAAGGTTTTCTTGGACCCGAAGGAAAGGAACAACACTGAGTACAAGCTGGAGACATTTTCTGCAGTATACAGGAAGCTTTCAGGCAGAGATGTCGTGTTTGAATATCCCATAACTGAGGCATAA 576 0.4253 MYTSRQKIRKDNDVEPTEFEESVGQALFDLENTNQELKSDLKDLYINSALQVDVSGSRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVILIATRRIMRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRIRYRIDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGRDVVFEYPITEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00081 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pte16g00081 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pte16g00081 191 Coils Coil 27 47 - -
Pte16g00081 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00081 Pte-Chr16 927018 930541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00081 1 192 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 78.646 3.97e-114 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00081 K02993 - qsa:O6P43_008566 355.91