Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00060 ATGCTATTCGAAGATGCTTATCAACTTGATTGTCATTACTATTCAGTTTCTGGGATTCGAAGTCTATCATCCAGTGCCCATAGTACTCCTGAGAAAAATGGTCATTCAGATGATGCTTCAAGAAGTCCAGAACTCCTTCAAGAGTTTCTGAAATCTGGTCCAAAGAAGGAATTTCTCCGTACATGCTGTGAAAAGGACAAAAAAAATTCCACCTCGGCTAAAGGCAGAATGACAGAAGCTAAACCAAGCAGTAGGAAAGCCAAGAAACAAGATTCAAAGAAAAACAGTTTTGATCCCAACAATCAGCCATCTCGGAAGCTGCATAGGAAGGGGGAAAACCCCACTCGACTTGTGTCTGCTCCAGAGCAACCTCCTGAATTTGGAAGTTCAAACTCTTGGATATGTAAAAATTCTGCTTGTCGAGCTGTTCTCTCTTTAAATGACATATTTTGTAAGAGATGCTCATGCTGTATATGCCACTTGTTTGATGATAACAAGGACCCAAGTCTTTGGTTGGTATGCAGTTCTGAATTACCGCAAAGTGAGTGTTGTGGGCTATCTTGTCACATTGAATGTGCTCAACAACGTGAAAGGGTAGGGGTTGTTGATCATGGGCAATTAATGCAACTAGATGGGAGTTATTGTTGCGCATCTTGTGGAAAAGTAACTGGCATTCTTGGATGTTGGAAAAAACAGCTTAGTGTAGCAAAGGATGCTAGGCGCTTAGACATTCTGTGTTACAGGATATACTTGAGTTACAAGCTCCTGGACGGGACCTCAAGATTTAAAGAATTACATGAAATTGTCGAAGAAGCCAAGGCTAAATTGGAAACAGAAGTGGGCCCACTGAATGGAGTGTCTGCTAAGATGGCACGTGGCATTGTCAGCAGACTCTCTATTGCTGGCGAGGTTCAGAAACTGTGCTCCCTTGCAATTGAGAAAGCTGATGTATTGATGAGCGGCATTTCTAATGTGGATCTAAATTCTAGAGAGGGTTCACTTCCTGCTGCCTGTAAGTTTGTTTTTGAGGAAGTGACGTCTTGCTCTGTTATAATCATATTGATTGACATTGCGAACTCCTCAACTGAAAATATTAAGGGCTACAAGCTCTGGTATTACAAGAGCAGAGATGAGATGCCTGGTAGAGATCCAGTTTGTGCCTTTTCAAGAGCTCAGAGGAGGATATTGGTATCCAATCTGCAGCCATGCACAGAATATGTATTTGAGATAGTATCTTACACAGATTCTGGTGACCTGGGCCACGCAGAGGCCAAGTGTTTCACAAAGAGTGTCGATATCGTTAGGAAGAATCCCAGTTCATTTGCTGCTATGGAGCATAACATGGAGAATCACCAGAGTGGAGGAAGTTCCTCATGCGCCAAACTAAATTCTGAGCCAAGTGATCACTCATCAGGATTCAAGGTCCGTGAACTGGGGAAGGTTCTGCATCTTGCCTTCGCTCAACAGCAGGAACACCTTGAAGTTGAAGGTTTCTGCAGTGCTGATTTAGAGAAATGCTGTGGAAGAAGCAGCACCATTAAGCCTGAAACTCTTCAAGAAAAGCAGTTGCCATTGGGGCTTGACTTAAATGTAGTTTCAGTGCCTGATCTGAATGAAGAACTAATTCCGCCTTTTGAGTTATCAAGGGATGAGGATAACGATTGCACGTTGCAGCAGGTTGTTGAGGCAGATGATGAAGCCTTTTCTCAAGACCTAAATAAGGATGGCCTAGCAAGATCGCATGGTAGTGGTGATTCTCATACCTGGACCCACGGTCCAACTGGAGATGTGGCAGCTGTTAATTCCCAGACAGAGTTGTGGAGGAAAAGGGTAACAACAGTGAATGAAGAGACACATGATTGTGATAGCACTTTGATAACTGGTTCACCCTTTCATGTGACTGGTAGCTCGTGTTCCTTGGATGAGAACTTTGAGTACTGCATCAAGACAATTCGTTGGCTTGAATGTGAGGGGCACATCAAGCAGGAATTTAGATTGAAATTGCTGACATGGTTCAGCTTGAGATCAACTGAGCAAGAACGTAGGGTGGTTCACACCTTCATTCAAACTCTCATTGATGATCCCAGTAGCTTGGCAGGACAATTGGTGGACTCATTTTCAGACATCATATCCAGCAAGAAGCCACGCAATGCATTCTGCAATAAGCTGTGGCATTAA 2178 0.4334 MLFEDAYQLDCHYYSVSGIRSLSSSAHSTPEKNGHSDDASRSPELLQEFLKSGPKKEFLRTCCEKDKKNSTSAKGRMTEAKPSSRKAKKQDSKKNSFDPNNQPSRKLHRKGENPTRLVSAPEQPPEFGSSNSWICKNSACRAVLSLNDIFCKRCSCCICHLFDDNKDPSLWLVCSSELPQSECCGLSCHIECAQQRERVGVVDHGQLMQLDGSYCCASCGKVTGILGCWKKQLSVAKDARRLDILCYRIYLSYKLLDGTSRFKELHEIVEEAKAKLETEVGPLNGVSAKMARGIVSRLSIAGEVQKLCSLAIEKADVLMSGISNVDLNSREGSLPAACKFVFEEVTSCSVIIILIDIANSSTENIKGYKLWYYKSRDEMPGRDPVCAFSRAQRRILVSNLQPCTEYVFEIVSYTDSGDLGHAEAKCFTKSVDIVRKNPSSFAAMEHNMENHQSGGSSSCAKLNSEPSDHSSGFKVRELGKVLHLAFAQQQEHLEVEGFCSADLEKCCGRSSTIKPETLQEKQLPLGLDLNVVSVPDLNEELIPPFELSRDEDNDCTLQQVVEADDEAFSQDLNKDGLARSHGSGDSHTWTHGPTGDVAAVNSQTELWRKRVTTVNEETHDCDSTLITGSPFHVTGSSCSLDENFEYCIKTIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVHTFIQTLIDDPSSLAGQLVDSFSDIISSKKPRNAFCNKLWH* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00060 725 SUPERFAMILY Fibronectin type III 344 417 IPR036116 GO:0005515
Pte16g00060 725 MobiDBLite consensus disorder prediction 574 595 - -
Pte16g00060 725 MobiDBLite consensus disorder prediction 63 95 - -
Pte16g00060 725 Pfam PHD - plant homeodomain finger protein 135 253 IPR032881 -
Pte16g00060 725 MobiDBLite consensus disorder prediction 31 45 - -
Pte16g00060 725 ProSiteProfiles Fibronectin type-III domain profile. 334 433 IPR003961 GO:0005515
Pte16g00060 725 Gene3D Immunoglobulins 336 431 IPR013783 -
Pte16g00060 725 MobiDBLite consensus disorder prediction 63 129 - -
Pte16g00060 725 PANTHER VIN3-LIKE PROTEIN 2-RELATED 23 725 IPR044514 GO:0010048|GO:0040029
Pte16g00060 725 MobiDBLite consensus disorder prediction 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00060 Pte-Chr16 619272 625369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00060 131 718 PHD Gene Family AT3G24440 48.419 2.63e-175 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00060 - - zju:107431859 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00060 16 619272 625369 Pte16g00060 16 619272 625369 RCT