Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00043 ATGGAAAACCGATTCAAAATGCGAATCTCTCGCATGTTTCGATCATCCTTTGGGTCTTGTAGGACTCGGAACATGTCGGATATTGTAGAGAAAGCAGTCTTTGTCCCACAAAACCATGGACCGTACCCAGAGTTTGAGTCATTGAAAGTGCTGTCATCACCCAAACCCCGCCCTTTTCCATCCGGCTGTAAACCTAAATGTTCTCAGATAACATCAGAAACCATCCATGGAGACACTGCTGTACGTGTCAATGATTCTCTCCCAAGAAAAAAGGTTTCTGAGAGGTCATCTGCTTCCATTTGGGGTAGTGCACTTGATGGGTGGTCTTGTCCACCTGCTTCGCCAATCTCACCTTTGAATCCTTTCTCCCACTGCAAGGAGTTAGGTTTCATTGACAGAACCAAAACTAAAACTTCAGAGTCATACAGAAGGAGTAACAAGAAAAAGAAGAAGAAGAATAGTACCCGGGTGAGAACTAGCAGAGAGCTTTTCCCATTTAGCTCTTCATCTATGGATTCCAGTTACGGTGGCAGTTGGTGGTATAGCAGTGATGACGACGATGATCGAGAGGATGAAACCGATACCCTATTCTCTTCTAGAAGTCTGTCTTCAAATTCTTCCGGTTCTCGCCGGAAAAAGCAACGGAATCGCCAGAGGAGGACTGTGATTCTGAGTTCTGAGGTGGGCGTTTTGCCATTACCGGGGAAAGTCAAGGATAGCTTTGCAGTGGTGAAGAAGTCCAGTGATCCATACAGTGATTTTAGAACGTCAATGGTGGAGATGATTGTTGAGAAACGCATATTTTCACCAAGTGGCTTGGAGAATCTCTTACAGTGTTTCCTCTCTCTGAATTCTCACCACCACCATAAGATTATTGTTGAAGTCTTCACTGAGATTTGGGAGGCTTTGTTTTCAAATTGGTCCTAA 927 0.4444 MENRFKMRISRMFRSSFGSCRTRNMSDIVEKAVFVPQNHGPYPEFESLKVLSSPKPRPFPSGCKPKCSQITSETIHGDTAVRVNDSLPRKKVSERSSASIWGSALDGWSCPPASPISPLNPFSHCKELGFIDRTKTKTSESYRRSNKKKKKKNSTRVRTSRELFPFSSSSMDSSYGGSWWYSSDDDDDREDETDTLFSSRSLSSNSSGSRRKKQRNRQRRTVILSSEVGVLPLPGKVKDSFAVVKKSSDPYSDFRTSMVEMIVEKRIFSPSGLENLLQCFLSLNSHHHHKIIVEVFTEIWEALFSNWS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00043 308 MobiDBLite consensus disorder prediction 142 156 - -
Pte16g00043 308 ProSiteProfiles OVATE domain profile. 243 302 IPR006458 -
Pte16g00043 308 MobiDBLite consensus disorder prediction 136 162 - -
Pte16g00043 308 MobiDBLite consensus disorder prediction 191 221 - -
Pte16g00043 308 NCBIfam uncharacterized plant-specific domain TIGR01568 241 304 IPR006458 -
Pte16g00043 308 Pfam Transcriptional repressor, ovate 247 304 IPR006458 -
Pte16g00043 308 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 123 305 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00043 Pte-Chr16 482846 483809 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte16g00043 Ovate 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00043 - - qsa:O6P43_007928 321.242