Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00034 ATGTTGTCACTCTCTGTCCTCAACCAACCACCTTTGCAGCAGCTGCAAAATCTGAACTTTAATACACACCTCTTTCAAATCCTCGATTACCCAAAATTTGGCAATTCTCAGACACCTCAAGTTCTTAGTTTTTATATCCCAAAACATAGAACCCACTTTCAAACAGTGTGCTGCAAGGTTCTTAAGGATTCTAAGGAGGAACCTAAGCCAGTGTTTAGCTCATCTAGTGGTGATGATGATGGAGGAGGAGGTGGGGGTGGTGACGATGGGGATGATGGGCAAGTGGAGAAGAAAAATGGATCTTCTGGGATTTTCCCAAAGCCCTTGAATTTCAATGCCGATGATGCAAAAACAGTCTTTGTAGCATTGGCAATATCGCTTGCGTTTCGTTCTTTCGTGGCAGAGCCGAGGTACATTCCTTCGTTGTCGATGTATCCTACATTTGATGTTGGAGATCGGCTTGTGGCTGAGAAGGTAACGTACTATTTCAGAAAGCCATGTGTCAATGACATTGTGATATTTAAAAGCCCTCCAGTGCTGCAAGAAGTTGGATATACTGATGACGATGTTTTCATAAAACGAATAGTTGCCAAGGAAGGTGATGTTGTGGAGGTTCAGAATGGAAAAGTTATAGTCAATGGGATTCAGAGAAATGAGAATTTTATTCTGGAACCGCCTGACTATGAAATGAGCCCAGTGCGCGTACCAGAGAAGTATGTGTTCGTGATGGGTGATAACAGGAATAATAGCTACGACTCACATGTGTGGGGTCCCTTGCCAGCGAAGAATATTATAGGCAGATCAGTACTGCGTTATTGGCCACCAAACAGGATAGGTGGCACAGTTTCTGAGGAAGCATGTCCTACTGAAGCCATTGAAACCAGTCCATCGTCTCAATGA 900 0.4367 MLSLSVLNQPPLQQLQNLNFNTHLFQILDYPKFGNSQTPQVLSFYIPKHRTHFQTVCCKVLKDSKEEPKPVFSSSSGDDDGGGGGGGDDGDDGQVEKKNGSSGIFPKPLNFNADDAKTVFVALAISLAFRSFVAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRKPCVNDIVIFKSPPVLQEVGYTDDDVFIKRIVAKEGDVVEVQNGKVIVNGIQRNENFILEPPDYEMSPVRVPEKYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVLRYWPPNRIGGTVSEEACPTEAIETSPSSQ* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00034 299 MobiDBLite consensus disorder prediction 67 99 - -
Pte16g00034 299 NCBIfam signal peptidase I 117 275 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte16g00034 299 PANTHER SIGNAL PEPTIDASE I 104 279 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte16g00034 299 Gene3D Umud Fragment, subunit A 129 286 - -
Pte16g00034 299 PRINTS Bacterial leader peptidase 1 (S26A) family signature 235 254 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte16g00034 299 PRINTS Bacterial leader peptidase 1 (S26A) family signature 191 203 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte16g00034 299 PRINTS Bacterial leader peptidase 1 (S26A) family signature 132 148 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte16g00034 299 SUPERFAMILY LexA/Signal peptidase 130 281 IPR036286 -
Pte16g00034 299 ProSitePatterns Signal peptidases I signature 3. 240 253 IPR019758 GO:0004252|GO:0016020
Pte16g00034 299 FunFam Peptidase/ serine-type peptidase 141 272 - -
Pte16g00034 299 Pfam Signal peptidase, peptidase S26 116 273 IPR019533 GO:0004252|GO:0006465
Pte16g00034 299 CDD S26_SPase_I 135 267 IPR019533 GO:0004252|GO:0006465
Pte16g00034 299 ProSitePatterns Signal peptidases I serine active site. 141 148 IPR019756 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00034 Pte-Chr16 417200 420977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00034 144 274 MADS-box Gene Family AT1G29960 30.303 4.95e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00034 K03100 - qsa:O6P43_004025 387.111