Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00028 ATGAATCAATATGTATTTCTTTGGTTACTTCTTAGTGTATTGGTCTTCCATGTCAAGGGGCAATCTACTGAAGAGTCACCTCCAGGAGATGCAGGCAATGGTTTTGAACCGCGCATTGCTGTTGTCATAGGAATCCTCTGTGTCATGTTTTCTCTGACATTCATCCTTCTTATATATGCAAAATTGTGCCACAGGTATCATTCATCTGCTCAGAGAGATATCGAAAATCATAGGAGACAGATGCGGTTGGGGTCTAGCTTTTCGGGTTCAGGGATTGACAAGAACATCATAGAGTCTCTTCCTTTCTTTAGATTTTCTAGGCTGAGAGGGACAAGGGAAGGGCTAGAATGTGCGGTATGCTTATCGAAATTCGAAGACATCGAAATGCTCAGGCAAAAGGTCAGTGCTGAAGATCCCTCAATATCGACATATTCAAACAGTTTAAGGTTCTTGTCTAATCCATCCGAACCAAGGGAGGATTCTGGCATAGAACTCTTTGTCCAAAGAGAGGAAACACGAGAGGGTGGTTCTTCAAGGTTCTGTGTTGGAAGCAGCTTTCGGAAAATTGAGAAGGTTGGTGATCAGGATACGGATTCGCTGATTCAGAAAGAAGCTAAGGATGATCTTGACGCTGATGCGAAATTCTTGCATAAACATAATCACATGGTTATTGTGTCTGATGTTGTTTTCAAGCACAGATGGAGCAGTGTCAGCTCTTCAGACCTGATGTTCTTGAATTCTGAGATGCTTAACGTTATGTCAAGCAATACATTCACTTCCATGGACTCTAGTAATGAGCAGATGTTAATAGAGAGAGAGAAAATCAAGAATATCGAAATGAAAAGCTTGTTCGAAAGTAAAGCTAGTTCACTCCAAAAAATAAGTGTAGGTCCTCCATCTTCATCAGATTCTAGAAGCAACACACCGAGCTACAAGAACCCAGTTGAGAAAAGATCAATGTCAGAAATAACAACTGTCACTAGGTTTGGGGATTCAGCCAAGAAAAACAGAATGCTTAGAGAAATTTTCTCAGTCGAGAGCGGCACAGAAGAGGCAAGAACTAGGCAGCTTTGGTTGTCAATTGCCAGAAGAACAATTGAATGGTTTGCCAAGAAAGAAAGGCTCAGCAATGTCGACATACACAGCACCCATTAG 1155 0.4156 MNQYVFLWLLLSVLVFHVKGQSTEESPPGDAGNGFEPRIAVVIGILCVMFSLTFILLIYAKLCHRYHSSAQRDIENHRRQMRLGSSFSGSGIDKNIIESLPFFRFSRLRGTREGLECAVCLSKFEDIEMLRQKVSAEDPSISTYSNSLRFLSNPSEPREDSGIELFVQREETREGGSSRFCVGSSFRKIEKVGDQDTDSLIQKEAKDDLDADAKFLHKHNHMVIVSDVVFKHRWSSVSSSDLMFLNSEMLNVMSSNTFTSMDSSNEQMLIEREKIKNIEMKSLFESKASSLQKISVGPPSSSDSRSNTPSYKNPVEKRSMSEITTVTRFGDSAKKNRMLREIFSVESGTEEARTRQLWLSIARRTIEWFAKKERLSNVDIHSTH* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00028 384 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 165 373 - -
Pte16g00028 384 MobiDBLite consensus disorder prediction 294 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00028 Pte-Chr16 373382 375068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00028 1 384 C3H Transcription Factor Family AT4G28890 40.045 3.34e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00028 K10664 - qsa:O6P43_003989 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00028 16 373382 375068 Pte16g00028 16 373382 375068 RCT