Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00026 ATGGAACGGATCGTCGGCGGAAAGTACAAGCTGGGCCGCAAGATCGGTAGTGGATCTTTCGGTGAAATATATCTTGCTACAAATGTTGACACTTTCGAGATCGTCGCTGTTAAGATTGAGAACAGCTCGACAAAGCATCCCCAACTTCTTTACGAGGCAAAGTTGTACAATATTCTTCAATCAGGAACTGGTATTCCTAATATGAAATGGTCCGGAGTAGATGGGGAGTTCAATGTGCTTGTTCTTGATTTGCTTGGACCAAGTCTCGAGGATTTGTTTGTTTATTGTGGAAGGATGTTTTCTTTAAAGACTGTATTGATGCTGGCTGACCAAATGATTTCTAGAATAGAGTATGTTCATTCCAAAGGTTTTTTACATCGAGATATAAAACCTGATAATTTCTTGATGGGACTAGGTCGAAAGGCTAATCAGGTTTACATGATTGATTTTGGGCTTGCAAAAAGATATCGGGACTCCACCACGAATCGCCACATCCCTTATAGGGAGAATAAGAACCTGACTGGGACTGCCCGCTATGCAAGCTGCAATACTCATCTTGGTATAGAGCAAAGCCGGAGAGATGATTTAGAATCACTAGGATATGTGCTCTTGTACTTCTTGAGAGGAAGTCTTCCCTGGCAAGGTCTAAAAGCTGTAGCAAAGAAGCAAAAGTATGATAAAATATGTGAGAAGAAGCTATCAACTCCTATTGAGGTCCTATGCAAATCTCATCCTGTGGAGTTTGCTTCATACTTTCACTATTGTCATTCTTTGACATTTGAACAACGACCTGATTATGGATTCTTGAAGCGCCTATTCCGTGACCTCTTTTCTCGTGAAGGATTGGATTTTGATTATGTATTCGATTGGACCATCTTGAAATATCAGCAAGCTCAGAAGAGTAGAGCTAAATCACATTTATCTCCTGTCCCCAGGGAAAGCAACAGTAGTGTAATGCCAATGAATGTGGACCGCTATCAAGGTCAGAAGTTACTGACTTTGTTCAAGTGGGTTGAGACCATTGCTTTTTTCATTATATTGGGAGCTAATGGTTTTAGAAATTGTCTGTAG 1071 0.4071 MERIVGGKYKLGRKIGSGSFGEIYLATNVDTFEIVAVKIENSSTKHPQLLYEAKLYNILQSGTGIPNMKWSGVDGEFNVLVLDLLGPSLEDLFVYCGRMFSLKTVLMLADQMISRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYMIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAVAKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFEQRPDYGFLKRLFRDLFSREGLDFDYVFDWTILKYQQAQKSRAKSHLSPVPRESNSSVMPMNVDRYQGQKLLTLFKWVETIAFFIILGANGFRNCL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00026 356 FunFam Casein kinase I isoform delta-like 1 336 - -
Pte16g00026 356 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte16g00026 356 PANTHER CASEIN KINASE-RELATED 7 308 - -
Pte16g00026 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte16g00026 356 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00026 356 Gene3D Transferase(Phosphotransferase) domain 1 1 329 - -
Pte16g00026 356 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00026 356 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Pte16g00026 356 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00026 Pte-Chr16 363411 366714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00026 7 227 CBL-interacting serine-threonine protein kinases AT4G24400 28.807 4.97e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte16g00026 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00026 K08960 - csin:114258861 615.535