Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00012 ATGACAATGGAAGGACTTCAAAACGGAGCAGATGACATGGAAATTGACGGACGTGAACTACAAACCCATAATCCGAGTCAAGCCAACTTTATTCCTAATGAATTCAACCCTAATTATCTCAAAATTTACTACAGCAAGCTTTTCCCTTATGCTGATACATACAAATGGCTGTGTTATGGAAATGATGGAAAGCATCCTGGATGTGATTCTTCATATTTCGGGAGAAGAGAATTTTCTTTCACATTGGACAATGATATTTATCTGCGATACCGATCTTGCAACAGCGCATCTGAGCTTGAAAGTTCCATCAAAGAAAAGTGTCCCTTTAAAATTGATATTGGAGCTGTTTACAGCATTGATCCAGCAAAAAGGCATGCATACAGTGGTGATAATGTGCTCACACCAGTTGAGAGGGAGCTCATTTTTGATATTGATATGACGGATTACGATGATGTTAGGTATTGCTGCTCAGGAGCTGATATTTGCTTGAAATGTTGGCCTTTGATGACTATTGCTATCAAAGTGATTGATACCTCCTTAAGAGAGGACTTTGATTTCAAACATATTCTCTGGGTATATAGTGGTCGACGTGGGGTTCATTGTTGGGTTTGCGATAGGAAGGCAAGAAGGTTGACTAATGAACAGAGAGCTGCAATTGCTGACTATTTTCGTGTCTACAAGGGAAATGAAAATAGCAATAAGAAAGTTTCCTTGATGGGAGCAGCTCTTCACCCTTTTCTTGTGAGATCATATATGGAAGTTTTAAAGGATTATTTCGAGAAAAAGTTGTTGCAAAGTCAAAACTTACTTGCTACTGAGGAGAGATATGAAAAGATCTTGGAAATGATCCCAGATGAATCAATTGCTTCTGAACTTAGGGGAAGGTGGCAGGACAATAGGCGCTCCTCTAAAGATGACATTGACTTTATCAGATGGGATCAACTTAAACACTTGTTGCAATCTGGGAAAAATAAGGGATTTGCACTGCGTAGGTGTGTAGAGGAGATTGTATTCTCTTTCACTTATCCTAGGCTTGACATGGAGGTCTCGAAACATATGAACCATTTGCTTAAAGCACCATTTTGTGTACACCCTAAAACAGGCCGTGTTTGTGTTCCTATTGATCCAAACCGTTGTGAGGAGTTTGATCCCACAGGAGTTCCAACCCTTTGCCAGCTCCTCGAAGAACTTAATGCTAGAACAGGAGATGTTGAAGACGGTAAGTAG 1227 0.4002 MTMEGLQNGADDMEIDGRELQTHNPSQANFIPNEFNPNYLKIYYSKLFPYADTYKWLCYGNDGKHPGCDSSYFGRREFSFTLDNDIYLRYRSCNSASELESSIKEKCPFKIDIGAVYSIDPAKRHAYSGDNVLTPVERELIFDIDMTDYDDVRYCCSGADICLKCWPLMTIAIKVIDTSLREDFDFKHILWVYSGRRGVHCWVCDRKARRLTNEQRAAIADYFRVYKGNENSNKKVSLMGAALHPFLVRSYMEVLKDYFEKKLLQSQNLLATEERYEKILEMIPDESIASELRGRWQDNRRSSKDDIDFIRWDQLKHLLQSGKNKGFALRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCEEFDPTGVPTLCQLLEELNARTGDVEDGK* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00012 408 SUPERFAMILY Prim-pol domain 35 398 - -
Pte16g00012 408 FunFam DNA primase 27 408 - -
Pte16g00012 408 Gene3D DNA primase, PRIM domain 26 406 - -
Pte16g00012 408 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 41 393 IPR014052 GO:0003896|GO:0006269
Pte16g00012 408 CDD AE_Prim_S 49 384 IPR014052 GO:0003896|GO:0006269
Pte16g00012 408 PANTHER DNA PRIMASE SMALL SUBUNIT 29 400 - -
Pte16g00012 408 Pfam DNA primase small subunit 142 375 IPR002755 GO:0003896|GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00012 1 399 Core DNA Replication Machinery Family AT5G41880 66.749 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00012 K02684 - qsa:O6P43_034334 683.33