Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02406 ATGGCATTGGCTGTTGAGTTTGTTTCGAAAGAAACCATCAAACCATCATGCCCAACACCAAACCATCTCAGACATTTGAAGCTATCTTTCTTTGATCAATTAGCACCAATAAAATATGTCTCAGTGTTTCTCTTCTACCCCAATCATGCTGCAGATTATCACAGTCACGAGACTGCTGACAAGATTCAGCTGCTCAAGACATCATTATCTGAAATTCTCACACACTACTATCCTCTTGCAGGAAGAATCAAAGAGAACTCAGTCATCGAATGCGATGATGATGGGGTTGAGTTTATTGAGGCCAGAGTCAATTGCCTTCTCTCAGACATATCCAAAGAACCTGATGTCTTTCCTGCAAGTAAGTTTTTGCCTCAGGAAGTCTGGTCCTCACAGGCAGCCACAGGGCCCCTCTTAGCTGTCCAAGCAAATTTCTTTGCATGTGGGGGTTTAGTAATTGCTGTCTGCATTTCACATAAGATAGCTGATGCTTCTACTTTGGGCGCACTCATCAAAGCCTGGTCAGCAACAGCACAGGGGAAAATTAGTGAGGATATGCGTCCTGTATGTATTCTCGGATCTCTGTATCCAGCAAAGGACTTCCTCTCTTCTTTTCGTCCATTTGCAGATGCTAAGAAGAACTCTAAATTAACAATAAGAAGGTATGTCTTTGAGGATTCAAAGCTGGCCAAGCTCAAGATTGAAGCAGCCAGTGATGCTGTGCATCGGCCATCGCGCCTTGAAGCAGTGATAGCACTCTTATGGAAATGTTTGATGACAGCTGCAAGTACAACTTTAGGTTATGGTAGACCAGTGATGATATGCCAAAATGTGAACAATCGAAAGAGGCATGTCCCTCCTCTGCCTGACAACTCTTTCGGCAATTTCATAGGTTACTTTACAGCTCATGATGAGAGTGATTGCGAGACGAAAGACGTGAAAAGCCTGGTGATTCTGTTAAGGAAAGGCTTAGAAGATTATTTGCAGTATACCAAAAAAATCCCTGAAGGTGATGCGTTCCAACTCGTTTGCGAATCTGGAATGAAGATGGGCAGCCATCTCAAAGAAAAAGATGGAGATTTATACATTTTCAGCAGTTATTGTAACTTTCCATTTTACACGGCTGATTTTGGGTGGGGCAAGCCTAAGTGGGTGACTGTTCCTGCAGCAGAACAAGCTCAAAATTCCATTTACATGTTGGATTCAGTTGATGGGAAAGGCATAGAAGCATGGTTGAGTTCCAATGAAGAATACATGTCCTCTTTAGATTGCAATGAAGAGCTCCTAAAATATGTTTCTCTCAAGTCTAGTGTGATTTTGTAA 1320 0.4235 MALAVEFVSKETIKPSCPTPNHLRHLKLSFFDQLAPIKYVSVFLFYPNHAADYHSHETADKIQLLKTSLSEILTHYYPLAGRIKENSVIECDDDGVEFIEARVNCLLSDISKEPDVFPASKFLPQEVWSSQAATGPLLAVQANFFACGGLVIAVCISHKIADASTLGALIKAWSATAQGKISEDMRPVCILGSLYPAKDFLSSFRPFADAKKNSKLTIRRYVFEDSKLAKLKIEAASDAVHRPSRLEAVIALLWKCLMTAASTTLGYGRPVMICQNVNNRKRHVPPLPDNSFGNFIGYFTAHDESDCETKDVKSLVILLRKGLEDYLQYTKKIPEGDAFQLVCESGMKMGSHLKEKDGDLYIFSSYCNFPFYTADFGWGKPKWVTVPAAEQAQNSIYMLDSVDGKGIEAWLSSNEEYMSSLDCNEELLKYVSLKSSVIL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02406 439 Gene3D - 1 202 IPR023213 -
Pte15g02406 439 PANTHER F21J9.9 6 432 - -
Pte15g02406 439 Pfam Transferase family 4 426 - -
Pte15g02406 439 Gene3D - 214 431 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02406 Pte-Chr15 34149808 34151282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02406 3 381 Monolignol Biosynthesis Gene Families AT5G48930 24.390 2.40e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02406 - - qsa:O6P43_023913 403.675