Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02387 ATGTACATTAAGGAGGTTTGCTTAGAAGGTTTCAAATCGTACGCAACAAGAACAGTGGTGACCGGTTTCGACCCCTTTTTCAATGCAATTACCGGTCTGAATGGGTCGGGCAAGTCGAACATACTCGACTCAATTTGTTTCGTTTTGGGCATAACTAACTTGCAACAAGTTCGGGCTTCCAATCTTCAGGAGCTTGTGTATAAGCAAGGTCAAGCTGGTATTACGAAGGCCACTGTTTCCATTGTCTTTGATAATTCGAATCGAGCAAGGAGTCCTATAGGGTATGAGGACCATCCTGAGATTACTGTGACTAGACAGATTGTGGTAGGCGGAAGGAACAAGTATTTGATAAATGGGAAACTTGCACAGCCGAGTCAAGTCCAGAACCTTTTTCATTCAGTGCAGCTGAACGTTAATAATCCACATTTCCTTATAATGCAAGGGCGAATCACCAAAGTGTTGAACATGAAACCACCTGAGATATTGTCTATGCTTGAAGAAGCTGCTGGAACAAGAATGTATGAGACAAAGAAAGAGTCTGCTCTGAAAACACTTGAGAAGAAGCAGAGCAAGGTTGATGAAATTAACAAACTTCTTGATCTCGAGATACTGCCTGCTCTGGAGAAATTGAGGAAGGAAAGGACTCAATACATGCAGTGGGCTAATGGAAATGCAGAATTAGATAGGTTTAGAAGGTTTTGTATTGCTTACGAGTATATGCAGGCAGAAAGAATAAGAGAAAATGCTGCGTCTGAGGTGGAAGAAGTGAGGGAAAAGATAACTGCGATAGATGATGAAGCAAAGATGTTGAGAGGAAAAATACAAGAAATGGAGGAAAATGTGGTCAAGCTGACTGCAGAAAAAGAAGCTTGTATGGGTGGGGAAGTTAAATCTTTGTCAGACAAAGTATTTGCACTTTCCGCAGATTTGGTAAGAGAAACATCTGTGATGAGTAATGTAGAAGATTCTCTCAAGGTTGAAAAGGCTAATGAAGAAAAGATTATTAGTAGCATCCAAGAGCTTAAACAATCCGTAGAAGATAAGAGTGCTGCTGTTAAAATGGCTGAAGAGGGAGCTGCAGATCTGAAAAAGAGAGTCGAGGAGCTCTCTAAAAGTCTGGAAAACTATGAAAAAGAGTATCAGGGAGTTTTAGCTGGAAAGAGCAGTGGAAATGAGGAGAAATGCATGGAAGATCAACTATGTGATGCTAAGATAGCTGTCGGAAGTGCTGAAACCGAACTGAAAATGCTGAAAACCAAAATTAGCCATTGTGAAAAGGAGCTAAAAGAAAAAACTGAACAATTGAGGTCAAGACGTGAAGAAGCTGTAGCTGTAGAAAATGAGCTCAATGCCAAAAAGAAAAATGTGGAGAAAATAAAAACAGAATTGGAAAGTATTGCATATAATGAGACTGAGATGGAGACATTACAAAAGGATCGTGCATCTCAGTTGGATGCAGTGCAAAAGTGGAAGGATGAGATACGTAATCTTTCAGCACATTTAACTAATGTCCAATTCACATACCGTGATCCTGTTAAAAATTTTGATAGATCAAAGGTGAAAGGTGTTGTTGCGAAACTTTTAAAAGTAAAGGATAGGTCAGCCATGACAGCCCTAGAGGTTACTGCTGGAGGGAAGCTGTTTAATGTTGTCGTAGATACAGAGAACACTGGGAAGCAATTGCTGCAAAATGGTGACCTTCGAAGAAGAGTGACCATCATACCTTTGAATAAAATACAATCACATACAGTTCCCTCGAGAGTTCAACAAGCTGCAGAAAGATTGGTTGGCAAAGAGAATGCTAAACTAGCGCTTACTTTGGTTGGTTATGAAGATGAATTGAAAAATGCAATGGAATATGTGTTTGGTTCAACTTTTATCTGCAAAACAACTGATGCAGCAAAGGAGGTGGCCTTCAATAGGGAGATACGGACCCCAAGTGTCACTTTTGAAGGAGACATATTTCAACCAAGTGGACTTTTGACTGGAGGAAGCAGAAAGGGTGGCGGTGATTTGTTAAGGCAGCTTCATGATTTGGCGGAAGCTGAATCAAGGCTTTTGACTCATCAGAGATGCTTATCTGATATTGAAGATAAGATGAACAAGCTTCTTCCTCTTCAGAAAAAATATATGGAGCTGAAAACACAGTTAGAACTTAAATTACACGAGCTTTCACTATTTGAGAAACGGCTGGAACAAAATGAACATCATAAGCTTGGGGAATTGGTGAAAAAGATCGAGCTAGAGCTTGCAGAAGCAAAATCTTCAATCGCAGAGAAGCACATATTGTATGAGAACTGTGTGAAGACCGTTGCTTCACTCGAGAAATCAATTAAGGAGCATGATAGCAATCGAGAAAGCAGGTTGAAAGATTTGGAGAGAAAGATCAAGTCAACTAAAACCCAAGTACAGTCGTCCTTAAGAGATCTTAAGGGACATGAAAATGAAAAAGAGAAACTTGTATTGGAAAAAGAAGCAGCGTTACAGGAGTGTACATCCTTGGAAAATCAGTTAGCTTGTTTGAGGTCACAAATCAGCAATCTTGCTTCAGAAATTGAAGAACAAAGAACTAGGGTTGCGACCACAAGAAATCACCATGATCAGGCACAAAATGAGCTCAGTTTGATCCGTCAAAAGATGAAGGAGTGTGACAAAGAAATTAGTCTCATGGTTAAGGAGCAGGATAAACATCAACATAAACTCAGTGAGAATTCTCTTGAAAAGAAGAGAATGGAAAATGAGGTAAAGAGGATGGAGGTGGAACAGAAAGAATGTTCAACTAAAGTAGATAGGTTGTTAGAGAAGCATGCATGGATTGCTTCAGAGAAACAACTCTTTGGTAGGAGTGGTACTGATTATGATTTTTCTTCACGTAATCCATCTAAAGCAAGGGAAGAACTTGAGAAATTGCAGGCAGAGCAATCTGGACTTGAGAAAAGGGTGAACAAGAAAGTTATGGCCATGTTTGAAAAAGCAGAAGATGAATACAATGACTTGATGTCCAAGAAAAATATTATTGAGAATGACAAGTCAAAGATCAAGAAGGTTATTGAAGAGTTAGATGAGAAGAAAAAAGAAACATTAAAAGTGACCTGGGTCAAAGTTAACAATGATTTTGGATCCATATTTTCCACTTTGTTACCCGGGACAATGGCAAAGTTGGAACCTCCCGAAGGAGGGAGCTTTCTTGATGGTCTTGAGGTTCGTGTTGCTTTTGGAAGTGTATGGAAACAGTCATTGTCAGAGTTGAGTGGAGGACAACGATCCCTACTGGCACTTTCTCTAATTTTGGCACTTCTACTTTTCAAACCTGCTCCACTTTACATACTGGATGAGGTTGATGCTGCTCTTGATCTAAGCCACACGCAAAATATAGGGAGAATGATAAAGGCTCACTTTCCACATTCTCAGTTTATTGTAGTGTCACTGAAAGAAGGCATGTTCAACAATGCGAATGTTATTTTCCGGACCAAATTTGTTGACGGCGTTTCAACTGTGCAGAGAACAGTTGCGACAAAGCACAAGTGA 3528 0.3982 MYIKEVCLEGFKSYATRTVVTGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNSNRARSPIGYEDHPEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKESALKTLEKKQSKVDEINKLLDLEILPALEKLRKERTQYMQWANGNAELDRFRRFCIAYEYMQAERIRENAASEVEEVREKITAIDDEAKMLRGKIQEMEENVVKLTAEKEACMGGEVKSLSDKVFALSADLVRETSVMSNVEDSLKVEKANEEKIISSIQELKQSVEDKSAAVKMAEEGAADLKKRVEELSKSLENYEKEYQGVLAGKSSGNEEKCMEDQLCDAKIAVGSAETELKMLKTKISHCEKELKEKTEQLRSRREEAVAVENELNAKKKNVEKIKTELESIAYNETEMETLQKDRASQLDAVQKWKDEIRNLSAHLTNVQFTYRDPVKNFDRSKVKGVVAKLLKVKDRSAMTALEVTAGGKLFNVVVDTENTGKQLLQNGDLRRRVTIIPLNKIQSHTVPSRVQQAAERLVGKENAKLALTLVGYEDELKNAMEYVFGSTFICKTTDAAKEVAFNREIRTPSVTFEGDIFQPSGLLTGGSRKGGGDLLRQLHDLAEAESRLLTHQRCLSDIEDKMNKLLPLQKKYMELKTQLELKLHELSLFEKRLEQNEHHKLGELVKKIELELAEAKSSIAEKHILYENCVKTVASLEKSIKEHDSNRESRLKDLERKIKSTKTQVQSSLRDLKGHENEKEKLVLEKEAALQECTSLENQLACLRSQISNLASEIEEQRTRVATTRNHHDQAQNELSLIRQKMKECDKEISLMVKEQDKHQHKLSENSLEKKRMENEVKRMEVEQKECSTKVDRLLEKHAWIASEKQLFGRSGTDYDFSSRNPSKAREELEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLKVTWVKVNNDFGSIFSTLLPGTMAKLEPPEGGSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVIFRTKFVDGVSTVQRTVATKHK* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02387 1175 Gene3D - 995 1174 IPR027417 -
Pte15g02387 1175 Pfam RecF/RecN/SMC N terminal domain 2 327 IPR003395 -
Pte15g02387 1175 Coils Coil 239 287 - -
Pte15g02387 1175 Coils Coil 178 198 - -
Pte15g02387 1175 Coils Coil 901 935 - -
Pte15g02387 1175 Coils Coil 982 1026 - -
Pte15g02387 1175 Coils Coil 789 886 - -
Pte15g02387 1175 FunFam Structural maintenance of chromosomes 2 995 1174 - -
Pte15g02387 1175 FunFam Structural maintenance of chromosomes 2 518 583 - -
Pte15g02387 1175 FunFam Structural maintenance of chromosomes 2 1 202 - -
Pte15g02387 1175 Pfam RecF/RecN/SMC N terminal domain 843 1161 IPR003395 -
Pte15g02387 1175 PIRSF SMC 1 1155 IPR024704 GO:0005524|GO:0016887
Pte15g02387 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1153 IPR027417 -
Pte15g02387 1175 Gene3D - 1 201 IPR027417 -
Pte15g02387 1175 Coils Coil 407 462 - -
Pte15g02387 1175 Coils Coil 473 493 - -
Pte15g02387 1175 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pte15g02387 1175 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Pte15g02387 1175 Gene3D - 577 667 - -
Pte15g02387 1175 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 1172 - -
Pte15g02387 1175 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pte15g02387 1175 SUPERFAMILY Smc hinge domain 477 685 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pte15g02387 1175 Gene3D - 518 677 - -
Pte15g02387 1175 Coils Coil 338 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02387 Pte-Chr15 33942916 33951410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02387 3 170 Structural Maintenance of Chromosomes family AT5G15920 22.024 8.35e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02387 K06674 - cave:132182958 1843.94