LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte15g02365	ATGGATGAGGTGAACGCTGCTAGTGAAGCTGAGCAAACTAAGCCGGATGTTGCCGACAGCTTAGCATCGTCGTCATCATCGTTATCATCATCTTTGGGATGGCGGCCCAGGCAGCTCGCTTTTAGTCCTTATGCTCTTCAGGGTGAGACGGCAAGCAAGTCTCGGACTTTGCGTGTAGTCGTCGGGAAACCTCTCGTGTCGAGATTAACCAAGGACATTGTTGAAACCTATAAGATATGCAATCCACAATTTAATTATTCTGAAGAGTTGAATCCAAAGAGATACTTGACCAGCCCATCAGCTGGAGTTCTTAATGATGGCTTTGACAATGTAAATTCAGATCTGATTCTGACAGTGAACTTTGTCTTGGTAAATTTAGAGAAAAATCGAAGGTACATTGTCAAAGATGTCCTTGGTCATGGAACTTTTGGTCAGGTAGCTAAATGTTGGGCTGCCGAGGCCAATAGTTTTGTTGCTGTGAAGATCATTAAAAACCAACCTGCTTACTACCAACAAGCACTGGTTGAAGTATCTATTTTGACCATGTTAAATAAGAAATATGATCCAGAGGACAAGAACCATATTGTTCGCATATATGATTATTTTGTCCATCAACGACATCTTTGCATATGTTTTGAACTCCTAGATACAAACTTGTACGAGCTGATCAAGATAAATCACTTTAGGGGATTATCCCTTAGCATCGTCCAGTTGTTTTCTAAGCAGATATTGCGTGGGTTGGCTCTGCTAAAAGATGCCGGTATTATTCATTGTGATTTGAAGCCTGAAAACATTCTTCTCTGCACAAGTGTTAAGCCAGCAGAAATCAAAATTATTGACTTTGGATCTGCATGCATGGAAGACCATACTGTTTATTCCTATATTCAGAGCCGTTATTATAGGTCTCCAGAAGTTCTTCTTGGATATCAATATGCCACTGCTATTGATATGTGGTCCTTTGGGTGTATAATTGCTGAATTGTTTCTAGGATTACCATTATTTCCAGGAGCTTCAGAGTTTGATCTTCTGAGGAGAATGATTGGAATACTTGGAGGCCAACCGCCTGATTATATATTGAAGGAGGCCAAAAACACCCGAAGGTTCTTCAAATGCATAGGAAATGTGCAGAATGTGGAAGATGGCGAAATTTCCACACAAAGCAGAAGTGCTTACAAAGCACTAACAGCAGAGGAATACGAAATGAGAGAGTTGAAAAAGCCTTCAATTGGAAAGGAATATTTTAATCACATGAACCTTGAGGCAATTGTCACGACCTATCCCTATAGGAAGAACCTGGGAAAAGAAGACATTCTCAAAGAAAGCCAAATTCGATTAGCACTTATTGACTTTTTGAGAGGGCTTGTTGAATTTGATCCTGCAAAACGATGGTCACCTTGTCAGGCTTCTAAGCATCCTTTTGTGACGGGTGAACCTTTCACACAGCCTTACAAGCCACCCCCTGAAACCCCTTGCGTGCCAGTTGTTCAAAATGTCAAAGTGGACCATCATCCAGGTGGAGGCCATTGGTTTGCTGCTGGACTCTCTCCTAACATTCCAGGAAAAACCAGAGCATCTTCTCATTATGGTAGTCAACATTTTCAAACAATGCCTTTTGCACATGCTAATAGTTATGGCAGTGTGGGGAGCTATGGAAGCTACAATGAGAGCATTGGACCTGGAAGTAGCTATGGGAGTTATGGAGACAGCAGCAAAATGTTTGCTTATTATTCACCTGGTGGACCATCTTACATGAACATGCATGCTCAGGGTAGTATGTCAATGCTTGGAAACAGTCCCGATGCACGAAAGAGGATTACGCAATACTCTCATGGGAATGGGCTTGGTTTGAGTCCATCAGCCGCAAATTTTGCACCACTGCCACTGGGTGCAAGTCCCTCACAATATACTCCTCCAAGTTCCTATATCCAGGTCTCAACAGGCTCTCCAGGACATTATGGATCAACGTCACCAGCAAGAGGCAGTTCTCATAGTTCACCTCTGGGAAAGGCGAGTGCTGGGAACCAATTCAATAGAAGGAAAAATTGGGGATATCCTGGTAGTAGTCAGACAAATGAAAGCACATTATCTCCACACTGGCAACCTCAAATCACAAACAGCTCTGTGCACAATGAGGGGTCACAAACACTTGGCAGCTCACCTTCATACCAGCAGTCAAATACTAATGCTCCTTGCTGGAAGCAACGTGGAGGAACCAGTTATCCTAACGTTCACCAATCGAGTTTAAACATACGTAGAGGTAGTAAGCACTTGCAGTCTGCAGAATCAAATCTGGACAGCTCAGAAACTAGTTCTTCTTTGCCTGATCCTGGTGATTGGGATCCTAACTACAGTGATGCGCTATTGCTGCATGACGAAGGTTATGATGCAACTTGCATAACCTCGGAGTTCGGCACAAATTTGAATCTTGGTACTGTACGGTCATTAATTGGAGTGGGTATCCAGCAAAACCATTTCCCAAACACAAGTTCACAGACAACCATACATAGAGTAAATGGACCAGCTCAATCTTACTCAAATGCGGTGGTGGGTAGCCCTCCATCTCATGAACCACGTGCAGGAAGCATGCGTTCCATTTCAAAGCCATCTCATTTTGTGCCACATGTGGCACAAAATTCCCCTAGTCGTCTGGGACAGCAATCTAGTCACCGCTTTAACCAAAGTATACCAGGCAGTGAATGGAGTCAGTTCAAAATGCAGGCACCTCCTCTCAGCTTTGGCAGCACAGGCCCAAGATCTCCGGGAAGCAGCTCCTTTAGCAATAGCATTCCGTGGGGGCAAAGAACAAACCATCCAGTCACAAGCATTCCACCCATGTACCGAGGAAGAAAAGACTACGCTTCATAG	2865	0.4363	MDEVNAASEAEQTKPDVADSLASSSSSLSSSLGWRPRQLAFSPYALQGETASKSRTLRVVVGKPLVSRLTKDIVETYKICNPQFNYSEELNPKRYLTSPSAGVLNDGFDNVNSDLILTVNFVLVNLEKNRRYIVKDVLGHGTFGQVAKCWAAEANSFVAVKIIKNQPAYYQQALVEVSILTMLNKKYDPEDKNHIVRIYDYFVHQRHLCICFELLDTNLYELIKINHFRGLSLSIVQLFSKQILRGLALLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACMEDHTVYSYIQSRYYRSPEVLLGYQYATAIDMWSFGCIIAELFLGLPLFPGASEFDLLRRMIGILGGQPPDYILKEAKNTRRFFKCIGNVQNVEDGEISTQSRSAYKALTAEEYEMRELKKPSIGKEYFNHMNLEAIVTTYPYRKNLGKEDILKESQIRLALIDFLRGLVEFDPAKRWSPCQASKHPFVTGEPFTQPYKPPPETPCVPVVQNVKVDHHPGGGHWFAAGLSPNIPGKTRASSHYGSQHFQTMPFAHANSYGSVGSYGSYNESIGPGSSYGSYGDSSKMFAYYSPGGPSYMNMHAQGSMSMLGNSPDARKRITQYSHGNGLGLSPSAANFAPLPLGASPSQYTPPSSYIQVSTGSPGHYGSTSPARGSSHSSPLGKASAGNQFNRRKNWGYPGSSQTNESTLSPHWQPQITNSSVHNEGSQTLGSSPSYQQSNTNAPCWKQRGGTSYPNVHQSSLNIRRGSKHLQSAESNLDSSETSSSLPDPGDWDPNYSDALLLHDEGYDATCITSEFGTNLNLGTVRSLIGVGIQQNHFPNTSSQTTIHRVNGPAQSYSNAVVGSPPSHEPRAGSMRSISKPSHFVPHVAQNSPSRLGQQSSHRFNQSIPGSEWSQFKMQAPPLSFGSTGPRSPGSSSFSNSIPWGQRTNHPVTSIPPMYRGRKDYAS*	955

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte15g02365	954	MobiDBLite	consensus disorder prediction	634	777	-	-
	Pte15g02365	954	Gene3D	Phosphorylase Kinase; domain 1	96	212	-	-
	Pte15g02365	954	MobiDBLite	consensus disorder prediction	907	954	-	-
	Pte15g02365	954	MobiDBLite	consensus disorder prediction	634	779	-	-
	Pte15g02365	954	Gene3D	Transferase(Phosphotransferase) domain 1	213	475	-	-
	Pte15g02365	954	FunFam	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	95	211	-	-
	Pte15g02365	954	CDD	PKc_YAK1	132	474	-	-
	Pte15g02365	954	SUPERFAMILY	Protein kinase-like (PK-like)	127	496	IPR011009	-
	Pte15g02365	954	MobiDBLite	consensus disorder prediction	844	895	-	-
	Pte15g02365	954	MobiDBLite	consensus disorder prediction	871	895	-	-
	Pte15g02365	954	SMART	serkin_6	132	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte15g02365	954	Pfam	Protein kinase domain	133	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte15g02365	954	ProSiteProfiles	Protein kinase domain profile.	132	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte15g02365	954	MobiDBLite	consensus disorder prediction	1	22	-	-
	Pte15g02365	954	ProSitePatterns	Protein kinases ATP-binding region signature.	138	161	IPR017441	GO:0005524
	Pte15g02365	954	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	255	267	IPR008271	GO:0004672\|GO:0006468
	Pte15g02365	954	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	61	477	-	-
	Pte15g02365	954	MobiDBLite	consensus disorder prediction	907	940	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte15g02365	Pte-Chr15	33645068	33657608	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte15g02365	131	376	MAP Kinase Gene Family	AT3G18040	33.080	1.46e-31	128

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-YAK	Pte15g02365		Pkinase	1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte15g02365	K18670		-	qsa:O6P43_030207	1382.47