Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02355 CTGTTGAGAATGCATATGTCCCTACTCCCTACTAAGAGACCGCAGTCACCTATTGAGACCCCATATGTTCCTCATAAGCCCCAAGGTGCTAAATCTTTGTCTGATAAAACAATTGAATTTGAAGGCATGACCATTGCTGAGCTTGCCAAGCGTACTGGTCAATCGATACCATATATGAAGCAAATTATTGTCAATGTTGGGGAGAAAATTAACTCAGAGTTTGAGACCCTCAGTATTGATGTTGCCGAGCTCATTTCGATGGAAGTTGGTGTAAATGTCAAGAGGGTCCATTCCAATGAAGGTGTGGATATTCAACCACCACCAGCAGTTGTGACAGTCATGGGCCATGTAGATCATGGAAAAACTTCTCTTTTGGATGCTTTACGCCAAACCTCAGTAGCTGCCAGAGAGGCTGCCTTTGTTGTGCGCATGCCTTCTGGAGCATCTATCACATTTCTCACCCCTGGTCATGCTGCATTTAGCGCAATGCGAGCAAGAGGGGCGGCTGTCACGGACATAGTAGTCCTAGTGGTTGCTGCTGATGATGGTGTGATGCCTCAAACACTTGAAGCCATGCCGCATGCTAAAGCAGCTAATGTACCAATCGTTGTTGCCATAAATAAATGCGATAAACCTGGTGCAAATCCTGAAAGTGTAAAGTTGCAGCTTGCTACTAAGGGCTTGATGCTGAAAGAGATGGTTTGGGATGTACAGGTTGTTGAGGTTTCAGCAAAACAAAAAATTGGACTAGTCAAGTTAGACGAGGCTTTACTCCTTCAGGCTGAAATGATGGATCTGAAAGCACGTATTGATGGCCATGCTCAAGCTTATGTGGTGGAGGCAAGACTTGACAGGGGTCGTGGTCCACTGGCAACTGCAATAGTTAAGGCAGGGAGTTTAGTATGTGGTCAGCATATTGTTGTGGGCTCAGAGTGGGGCAGAATAAGGGCTATTAGAGATATGGTAGGAGAATCGACTAATCGGGCTAGTCCAGCAATGCCTATTGAGATTGAAGGGTTAAAGGGACTTCCTATGGCTGGCGATGATATTATTGTTGTGGATTCTAAGGATCAAGCTCGAATGCTTAGTGCAGTAGGGAAAAGAAACACGAAGAAGGACAGGCTTAACAAACATGTGGAAAAGAATGAGAATAGGAAGCTCACTAGGGCTGAAATGCCTATCATAGTGAAAGGGGATGTTCAAGGCACTGTCCAAGCTGTTGCAGATGCATTGAGAACTTTAGATAGCCCTCAGGTGTTTGTAAATATAGTCCATGTTGGTGTGGGGCCAATCGCACTATCTGATGTAGAGTTGGCGCAAGCTTGTGGTGCTTGCATAGTAGGATTTAATGTGAAGAGTCCTCCTCCTTCTATCAGTCAGGCGGCAATACGAGCGCAGATAAAGATAAAGCTGCACCGAGTGATTTACCATCTTTTGGAGGACATCGGGAATTTGATAGTGGAGAAGGCCCCTGGAACTGCTCAGACCCAGGTGGTTGGCCAGGCCGAGGTGTTGAGCATCTTTGAGCTGAAAGGAAGAAGCAAAGCCAAAGGTGAGGATGTGAAAATAGCTGGTTGTCGGGTGCTCGATGGGTGTGTCAACAAATCAGCAACCGTGAGGCTGATGAGGAGTGGGGAATTTGTTTTCAAAGGGCTCTGTGAGTCACTGAAGCGTGAGCAGCAGGATGTGGATATAGTGAGGAAAGGAAATGAGTGTGGACTTGTAATTCGGGACTGGTATGATTTCAAAGTTGGAGATGTTGTCCTGTGCTTGGAGCATGTAGTGAGGAAGCCGAAGTTCATTAAGTCAGAGAGTGGTGCTGTTAGAATAGATTGC 1836 0.4602 LLRMHMSLLPTKRPQSPIETPYVPHKPQGAKSLSDKTIEFEGMTIAELAKRTGQSIPYMKQIIVNVGEKINSEFETLSIDVAELISMEVGVNVKRVHSNEGVDIQPPPAVVTVMGHVDHGKTSLLDALRQTSVAAREAAFVVRMPSGASITFLTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMPHAKAANVPIVVAINKCDKPGANPESVKLQLATKGLMLKEMVWDVQVVEVSAKQKIGLVKLDEALLLQAEMMDLKARIDGHAQAYVVEARLDRGRGPLATAIVKAGSLVCGQHIVVGSEWGRIRAIRDMVGESTNRASPAMPIEIEGLKGLPMAGDDIIVVDSKDQARMLSAVGKRNTKKDRLNKHVEKNENRKLTRAEMPIIVKGDVQGTVQAVADALRTLDSPQVFVNIVHVGVGPIALSDVELAQACGACIVGFNVKSPPPSISQAAIRAQIKIKLHRVIYHLLEDIGNLIVEKAPGTAQTQVVGQAEVLSIFELKGRSKAKGEDVKIAGCRVLDGCVNKSATVRLMRSGEFVFKGLCESLKREQQDVDIVRKGNECGLVIRDWYDFKVGDVVLCLEHVVRKPKFIKSESGAVRIDC 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02355 612 Gene3D Translation factors 270 388 - -
Pte15g02355 612 Pfam Elongation factor Tu GTP binding domain 154 258 IPR000795 GO:0003924|GO:0005525
Pte15g02355 612 SUPERFAMILY Translation proteins 495 597 IPR009000 -
Pte15g02355 612 NCBIfam small GTP-binding protein domain 110 222 IPR005225 GO:0005525
Pte15g02355 612 FunFam Translation initiation factor IF-2 103 269 - -
Pte15g02355 612 CDD IF2_eIF5B 110 264 - -
Pte15g02355 612 FunFam Translation initiation factor IF-2 495 599 - -
Pte15g02355 612 FunFam Translation initiation factor IF-2 388 495 - -
Pte15g02355 612 CDD IF2_mtIF2_II 273 363 IPR044145 -
Pte15g02355 612 NCBIfam translation initiation factor IF-2 41 594 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pte15g02355 612 CDD mtIF2_IVc 500 590 - -
Pte15g02355 612 SUPERFAMILY Translation proteins 271 354 IPR009000 -
Pte15g02355 612 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 106 267 IPR000795 GO:0003924|GO:0005525
Pte15g02355 612 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 375 500 IPR036925 -
Pte15g02355 612 Gene3D - 389 492 IPR036925 -
Pte15g02355 612 Pfam Translation-initiation factor 2 371 482 IPR023115 -
Pte15g02355 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 288 IPR027417 -
Pte15g02355 612 Gene3D Translation factors 495 597 - -
Pte15g02355 612 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 35 606 IPR015760 -
Pte15g02355 612 Gene3D - 105 269 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02355 Pte-Chr15 33554864 33557838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02355 110 576 Eukaryotic Initiation Factors Gene Family AT1G76810 24.364 1.47e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02355 K02519 - zju:107430122 889.797