Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02344 ATGAACGGAGTACATACTGCGTCATCGGTCGCGGCGGCGAATTCTGTGCCGCCTTTCTTGAGCAAGACGTATGACATGGTTGATGATCAGTCAACCAACTCGTTGGTGTCTTGGAGTGATAATAACAACAGCTTTATTGTACGGAATGTCCCTGAGTTTGCCAAGGACCTCTTGCCCAAGTACTTCAAGCACAACAACTTTTCTAGCTTTGTCAGGCAGCTGAATACTTATGGATTCAGGAAGGTGGATCCAGATCGCTGGGAATTTGCAAATGAGGCATTTTTGAGGGGCCAGAAACACCTATTAAAGAGTATTACCCGGCGAAAACAACCTCATCTGAATAATTATCAGCAACAACCTCAACCACAGAATCCATCAAGTGGATCTTGTATTGAGGTTGGAAAGTTTGGGCTGGAGGAAGAGGTTGAAATACTTAAAAGAGATAAGAATGTTCTCATGCAGGAACTTGTTAAGTTGAGGCAACAACAGCAATCAACAGATCATCAGTTGCAAAATGTTGGGCAACGTGTACAGATCATGGAACAGAGACAACAAAAGATGATGTCTTTCCTTGCGAAAGCAGTCCAGAGTCCTGGCTTCTTAGCCCAGATTGTACAGCAACAAAATGAAAACAATAGGCACTTCACTGGAGGTAATAAAAAGAGGAGGTTGCCCAGGCAGGAAGAAGATAGTGTATCCAGTGAGCTTGGTAACCATGCTCCTGATGGCCGTATGGTTAAGTATCTCCCTTCCATGAATGAGGCAGCAAAGACATTGCTGCGTCAGATATTGCAGATGAATACTTCTCCAAGGAGGGAGTCTTCTGCGAAAAACCCTGATGCCTTCCTTATTGACGGTGTTCCTTCATCCCATACTCTAGATAACCGGAGTTCCCCTATCCGGACTTCAGGAGTGACCCTTTCTGAAGTTCCACCCTCTTCTGGGCTATCCTATATGGATATAGAAGGTGAATTTCCAATGAATTTTCCTTCCAATGGCATTTCGGAGAGACAGTCTTCTAGCAATGCATTGGCAGGTAGTGTTAAAACAGCTCAGTTTTTGGAATTGAATTCTTCTAACGATCAAAATACCATTCTCCCTGACCTTTGTGGAGAGCAGAGGTTGATGTCAGAATGTAATTCGGCTAATCCTGATTTGGACTTTGCTGGTTCAGAATCTGGCAATGGTGGAAATTTGGAATCAATGTCAGCTATTTTAGATGGGACACTGGGCCTTGAAAATGATGATTTCTCTGGTGTAGAGAATATGATGTTGCCTGGAATTAATGATGTCATCTGGGAGTATTTTCATGATGTTCCATTTGATGAAGATCGGGATGAAGTTACTTCCATTTCACTAGGAAGTGATTTGACAAAGGAACAAGAGTTGTCTGAGAAAAAGAGGGAACAGGGAAAGATGAGTAAGATTCAAAATCTGGACCATCTCACTGAAAAGATGGGTCTTTTGACTTCCGAGGGTAGGGGGTGA 1488 0.4321 MNGVHTASSVAAANSVPPFLSKTYDMVDDQSTNSLVSWSDNNNSFIVRNVPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEAFLRGQKHLLKSITRRKQPHLNNYQQQPQPQNPSSGSCIEVGKFGLEEEVEILKRDKNVLMQELVKLRQQQQSTDHQLQNVGQRVQIMEQRQQKMMSFLAKAVQSPGFLAQIVQQQNENNRHFTGGNKKRRLPRQEEDSVSSELGNHAPDGRMVKYLPSMNEAAKTLLRQILQMNTSPRRESSAKNPDAFLIDGVPSSHTLDNRSSPIRTSGVTLSEVPPSSGLSYMDIEGEFPMNFPSNGISERQSSSNALAGSVKTAQFLELNSSNDQNTILPDLCGEQRLMSECNSANPDLDFAGSESGNGGNLESMSAILDGTLGLENDDFSGVENMMLPGINDVIWEYFHDVPFDEDRDEVTSISLGSDLTKEQELSEKKREQGKMSKIQNLDHLTEKMGLLTSEGRG* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02344 495 MobiDBLite consensus disorder prediction 287 311 - -
Pte15g02344 495 SUPERFAMILY "Winged helix" DNA-binding domain 14 108 IPR036390 -
Pte15g02344 495 MobiDBLite consensus disorder prediction 290 311 - -
Pte15g02344 495 Gene3D - 11 109 IPR036388 -
Pte15g02344 495 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 335 IPR027725 -
Pte15g02344 495 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g02344 495 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g02344 495 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g02344 495 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g02344 495 Coils Coil 135 162 - -
Pte15g02344 495 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g02344 495 MobiDBLite consensus disorder prediction 215 235 - -
Pte15g02344 495 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte15g02344 495 MobiDBLite consensus disorder prediction 459 479 - -
Pte15g02344 495 FunFam Heat shock transcription factor 1 12 109 - -
Pte15g02344 495 MobiDBLite consensus disorder prediction 455 479 - -
Pte15g02344 495 MobiDBLite consensus disorder prediction 209 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02344 Pte-Chr15 33480568 33489359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02344 5 494 HSF AT5G16820 51.292 4.93e-150 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte15g02344 HSF_DNA-bind 3.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02344 K09419 - qsa:O6P43_001765 579.326