Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02331 ATGGGGACACAGCCACAATGTAGAGAGGAGGAGGAAGAGGACGAAGTGGAGGAGGTGCCATCGGGTCGTGGAGCCACGGTTTCCGGTCAATCAATGTCTACTAGTCGGAGTATCGGGTCGCCGTCCAGCAGGAGTGAGGCGACTATGGCGACGCAAGCTAGTGAGAGCACTTTCCTCAGGCTCAACGATCTCGACCTTCACGGTGATGAAGCTGGATCGCAAGGCGCCGTCGCTAGTAAGAAAAAGAAAAGAGGTCAACGCGTTGTTGGAGGTGACAAGAGTGGGCGAGGGCTCCGGCAATTTAGCATGAAAGTTTGTGAGAAAGTGGAAAGCAAGGGAAGGACTACTTATAATGAGGTAGCAGATGAACTTGTGGCTGAGTTTGCTGATCCTAGCAGTAGTTTGTCATCTCCTGATCAGCAACAGTATGATGAGAAAAATATCAGGCGAAGGGTTTATGATGCATTGAACGTTCTCATGGCAATGGATATTATATCCAAGGACAAAAAGGAAATACAGTGGAAGGGTCTACCTCGTAATAGTTTTAATGATATTGAAGAACTGAAGACAGAGCGTCATGCACTCAAAACTAGGATTGAGAAGAAAGCTGCTTATCTGCGAGAGCTGGAGGATCAATACATAGGCCTTCAGAATCTCATACAACGAAATGAGCAATTATATGGCTCTGGAAATGCTCCCACTGGTGGTGTAGCTTTACCTTTTATTCTTGTGCAGACGCGTCCGCATGCTACTGTCGAGGTCGAAATATCTGAAGATATGCAGCTGGTGCATTTTGATTTCAACAGCACGCCATTTGAATTGCATGATGACAATTATGTTCTGAATGCAATGAAGCTATGCGAAAGACCTGTTGATGATAATGCAGTACAAAATGCTACTGTAGATGGAGGAGAAGGTTCTAGTGTACCAAGATTGTATCCAACAAATGTTGCTGCTTCTCCATCAACAATGAATCCTCCAGTTAGGATTCCTACTTCGCCGCCACTCCCTGGAATATTGAAGGCTCGTGTTAAGCATGAGCATTAG 1047 0.4585 MGTQPQCREEEEEDEVEEVPSGRGATVSGQSMSTSRSIGSPSSRSEATMATQASESTFLRLNDLDLHGDEAGSQGAVASKKKKRGQRVVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSSSLSSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRNSFNDIEELKTERHALKTRIEKKAAYLRELEDQYIGLQNLIQRNEQLYGSGNAPTGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMKLCERPVDDNAVQNATVDGGEGSSVPRLYPTNVAASPSTMNPPVRIPTSPPLPGILKARVKHEH* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02331 348 SMART E2F_TDP_2 93 176 IPR003316 GO:0005667|GO:0006355
Pte15g02331 348 SUPERFAMILY "Winged helix" DNA-binding domain 96 177 IPR036390 -
Pte15g02331 348 SMART DP_2 183 346 IPR014889 -
Pte15g02331 348 FunFam Transcription factor-like protein DPB 182 307 - -
Pte15g02331 348 Gene3D Transcription factor DP 182 312 IPR038168 -
Pte15g02331 348 Gene3D - 89 181 IPR036388 -
Pte15g02331 348 PIRSF Txn_factor_DP 3 348 IPR015648 GO:0005667|GO:0051726
Pte15g02331 348 MobiDBLite consensus disorder prediction 318 338 - -
Pte15g02331 348 MobiDBLite consensus disorder prediction 24 59 - -
Pte15g02331 348 CDD DP_DD 181 284 IPR014889 -
Pte15g02331 348 SUPERFAMILY E2F-DP heterodimerization region 183 294 IPR037241 -
Pte15g02331 348 Pfam E2F/DP family winged-helix DNA-binding domain 96 176 IPR003316 GO:0005667|GO:0006355
Pte15g02331 348 FunFam Transcription factor-like protein DPB 88 181 - -
Pte15g02331 348 Pfam Transcription factor DP 184 315 IPR014889 -
Pte15g02331 348 MobiDBLite consensus disorder prediction 1 94 - -
Pte15g02331 348 Coils Coil 192 226 - -
Pte15g02331 348 PANTHER TRANSCRIPTION FACTOR DP 25 324 IPR015648 GO:0005667|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02331 Pte-Chr15 33324298 33331069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02331 94 285 E2F-DP Transcription Factor Family AT5G02470 54.922 8.31e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Pte15g02331 DP 5.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02331 K04683 - qsa:O6P43_019777 547.74