Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02317 ATGGCGTTAGCCCAGTCAGGGAAGCCGTGCAAGAAGGATAGACCAGCAAGCAAAGCATGGCAGTCTATGTCTCAATCAATTGAACCAACTCATTTCTTCAAAGTCATACTACCCTCTACCATTGAAGAGAAGAAACTGAGAATCCCAAACAAATTTGTGAAGAAATTTGGGAATGAACTATCTGCTGTTTCAACAGTTACTACTCCAAATGGCTGTATGTTGAATTTGAGTTTACATAAATCTGAGAACTCAATTTGGTTCACAGATGGTTGGCAAGAATTTATAGAACACAACTCTATCTGTACTGGATACTTCTTGGTGTTCAGATACGAAGGGAATTCAAATTTTCATGTTCTGATATTTGACATGACTGCCACTGAGATTGACTATCCACACCATGATCAAAGCAATCGTGAGGGGTTGGCTGATCTCAGCAATCATTATCAATCAAATGATGAGAATTATTCAGGAACTATAGAGATTCCAACAGATTCTTCTACTCATAGTAAGTATCATAGATGTTCAAAAGTCATGGCTCTGCAGAACCATGATAGGTCCATATCAGCGTCTCCAACTCATAATATTGACAAGCATTGCTCAAGTGTTGCTCCTGACAAGTACAAGCACAGACATGGTGGTGGCTATGACACAAGGAGCAAGAGGCGTAAGCTGGGAATTCAAGAACAAACAATTCACATTGGTGGTGATATGAATTCAGCAAGGCAAAGCAGCCTGGAATTAATCCCAGTATCTATGCCTCAGTGGTTAACAGAAGCTGAGAGGAGTGGTGAAGGTGTGTTTCTCACCAAATCAATGTGTTACTATTCAAATAGGAAATCACTGAGTCCAGAACAAAGACAAGATGTAATCAATGCTGCAAAGAAGTACAGGCCTCAAAATCCTCATTTCGTGGTAGTAGTGAGGCCATACAATATTTACAATTGTTACGTGGGTGTGCCTGCAAAATTTGCATCCAAGTTTCTAAGACGAAAGAGTGGACTTCTGAATCTCATGGTTTCTGATCAAAGAAAGTGGGAAATGCGGTTTTATTACGGTGGTGGCAGCTATAGAATAAGCAAGGGATGGGCTGCTTTTGCTAGGGACAATAAGCTGGAGGAAGGAGATGTCTGTATTTTTGAACTCAACAATGGCAAGGGAAATATTGAGATGAAAGTCAAAGTTTTTCATGTCTCAGATTTTATGAGACCCCTAGACATCATATGA 1224 0.4011 MALAQSGKPCKKDRPASKAWQSMSQSIEPTHFFKVILPSTIEEKKLRIPNKFVKKFGNELSAVSTVTTPNGCMLNLSLHKSENSIWFTDGWQEFIEHNSICTGYFLVFRYEGNSNFHVLIFDMTATEIDYPHHDQSNREGLADLSNHYQSNDENYSGTIEIPTDSSTHSKYHRCSKVMALQNHDRSISASPTHNIDKHCSSVAPDKYKHRHGGGYDTRSKRRKLGIQEQTIHIGGDMNSARQSSLELIPVSMPQWLTEAERSGEGVFLTKSMCYYSNRKSLSPEQRQDVINAAKKYRPQNPHFVVVVRPYNIYNCYVGVPAKFASKFLRRKSGLLNLMVSDQRKWEMRFYYGGGSYRISKGWAAFARDNKLEEGDVCIFELNNGKGNIEMKVKVFHVSDFMRPLDII* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02317 407 Pfam B3 DNA binding domain 32 122 IPR003340 GO:0003677
Pte15g02317 407 Pfam B3 DNA binding domain 304 395 IPR003340 GO:0003677
Pte15g02317 407 ProSiteProfiles B3 DNA-binding domain profile. 31 124 IPR003340 GO:0003677
Pte15g02317 407 SMART B3_2 303 398 IPR003340 GO:0003677
Pte15g02317 407 SMART B3_2 32 124 IPR003340 GO:0003677
Pte15g02317 407 ProSiteProfiles B3 DNA-binding domain profile. 302 398 IPR003340 GO:0003677
Pte15g02317 407 Gene3D - 281 401 IPR015300 -
Pte15g02317 407 PANTHER B3 DOMAIN-CONTAINING 26 392 - -
Pte15g02317 407 CDD B3_DNA 301 395 IPR003340 GO:0003677
Pte15g02317 407 MobiDBLite consensus disorder prediction 199 218 - -
Pte15g02317 407 SUPERFAMILY DNA-binding pseudobarrel domain 26 123 IPR015300 -
Pte15g02317 407 CDD B3_DNA 31 122 IPR003340 GO:0003677
Pte15g02317 407 SUPERFAMILY DNA-binding pseudobarrel domain 297 397 IPR015300 -
Pte15g02317 407 Gene3D - 24 125 IPR015300 -
Pte15g02317 407 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02317 Pte-Chr15 33198501 33200138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02317 276 401 B3 DNA Binding Superfamily AT3G18990 37.008 2.80e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte15g02317 B3 5.1e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02317 - - zju:107409773 231.491