Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02290 ATGGGAACTATCGAAGAGAAGCCTTGCCTTGCTGTTGATGAAGAAATCCCTTTTAGCTCTTCACCATCTGGAAGGAAAGTCCAATCTTTTGATTTTGAGACAAATAATGTGCTTACACGAGCAAATTCAGGAAGTTCATGGATTTTAAAGCAAATGCGGACAAGACCAATCAGAAGCATATATATTTTATTAATAAAAGCGAAGATCAATATCTTGCTGCCGTTTGGTCCCTTGGCAATATTATGTCACTACCTAACAGGAAAGCATGGATGGGTTTTTTTCTTTAGCTTACTGGGCATAACTCCATTAGCAGAACGTTTGGGATTCACTACTGAGCAGCTTGCATTCTATACAGGACCAACAGTCGGTGGTCTCCTAAATGCAACATTCGGCAATGCAACAGAAATGATTATATCCATATATGCACTGAAGAATGGCATGATTAGAGTTGTTCAACAATCGCTACTGGGTTCAATCTTATCAAATATGCTTTTAGTTCTTGGATTTTCGTTCTTTACTGGCGGCATCGTACATAACAAAAAGGTTCAGGTTTTCAACAAGGCTGCTGCAGTTGTGAATTCTGGATTGCTTTTGATGGCTGTAATGGGGATATTGCTTCCAGCAGTGCTTCATTTTACACACACAGAGGTTCATTTTGGGAAGTCAGAGTTAGCTCTTTCAAGATTTAGCAGCTGCGTGATGCTAATTGCATATGCAAGCTACCTATTCTTTCAACTAAGATCTCAACAAAGTCTTTATAGTCCTATTGAAGAGGATGGAGATAGCACAGAAGATTCTGATGATGACGAGGTCCCTGAATTAACTCGATGGGAAGCAATAGCCTGGCTCGCTATTCTGACAGTGTGGGTATCTGTGTTGTCCGGATACCTTGTCGACGCGATTCAGGGAGCATCTGACTCATGGAACATGCCAGTGTCTTTCATCAGTGTCATCTTACTGCCAATTGTGGGCAATGCAGCTGAGCATGCAAGTGCTATCATGTTTGCCATGAAGGATAAGCTTGACATAACACTTGGAGTGGCAATTGGATCATCCACGCAAATATCCATGTTTGTGATCCCCTTCTGTGTAGTAGTTGGGTGGTGCATGGGAAAAGAAATGGACTTGAACTTTCAACTCTTTGAGACTGCCACACTTTTCATCACTGTACTAGTAGTTGCATTTATGCTACAGGAAGGAACTTCGAATTATTTCAAGGGATTGATGCTTATTCTGTGCTATCTCATTGTGGCAGCAAGCTTTTTTGTGCATGTTGACCTTACCAATGAAGATAATTGA 1299 0.4103 MGTIEEKPCLAVDEEIPFSSSPSGRKVQSFDFETNNVLTRANSGSSWILKQMRTRPIRSIYILLIKAKINILLPFGPLAILCHYLTGKHGWVFFFSLLGITPLAERLGFTTEQLAFYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGFSFFTGGIVHNKKVQVFNKAAAVVNSGLLLMAVMGILLPAVLHFTHTEVHFGKSELALSRFSSCVMLIAYASYLFFQLRSQQSLYSPIEEDGDSTEDSDDDEVPELTRWEAIAWLAILTVWVSVLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDLTNEDN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02290 432 Pfam Sodium/calcium exchanger protein 280 419 IPR004837 GO:0016020|GO:0055085
Pte15g02290 432 Pfam Sodium/calcium exchanger protein 91 246 IPR004837 GO:0016020|GO:0055085
Pte15g02290 432 NCBIfam calcium/proton exchanger 64 422 - -
Pte15g02290 432 FunFam Vacuolar cation/proton exchanger 120 259 - -
Pte15g02290 432 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 51 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pte15g02290 432 FunFam Vacuolar cation/proton exchanger 267 423 - -
Pte15g02290 432 NCBIfam calcium/proton exchanger 72 422 IPR004798 GO:0006816|GO:0015369
Pte15g02290 432 Gene3D - 120 258 IPR044880 -
Pte15g02290 432 Gene3D - 266 423 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02290 Pte-Chr15 32913431 32917675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02290 57 431 Antiporters AT1G55730 75.798 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02290 K07300 - qsa:O6P43_017901 706.057