Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02272 ATGACGATATCGAATAATTCCTTCACGTTAACCAGTGATGACCAGGTGAAAATGGCGAAATTTTTGCTTCATGGCACTCTCCATGCTACGGTCCATGAAGTGGATGAGATCCATGGTGCAGGGTCAGGGAATTTTCTTACCAAGATGAAAGAAAACATTGAGGAGCATGTTGGAGTTGGTAAGGGAATACCCAAAATGTATGCAACCATTGATCTGGACAAGGCTAGAGTTGGGAGGACGAGAACTATTCAAAATGAGCCCTCTAAACCAAAGTGGCAGGAGTCCTTTCACATCTACTGTGCACATATGGCTTCCAATGTTATTTTCACTGTAAAAGATGCTAACCCCATTGGAGCAACCCTGATTGGAAGAGCATATTTACCGGTTTTAGAACTCATGAAAGGGAAGGAAGTTGATAAATGGATTGAAATACTCAATGAGGATAAAGAACCAGTGCGTGGAGGTTCGAAGATTCATGTCAAGTTACAGTATTTCGAAATCAGAAAGGATCCAAACTGGGGACGAGGTATTGGAAGTGGTAAATATCCTGGGGTGCCATACACTTTTTTCTCACAGAGACAAGGATGCAAAGTCACTCTTTACCAAGATGCTCATGTCCCAGAACAGTTCATTCCCAAGATACCACTTGCTGGAAACAACTTTTATGAGACTCACCGATGCTGGGAGGATGTGTTTGATGCAATTACTAATGCTAAGCACTTGATATACATTACTGGTTGGTCTGTCTACACGGAGATTAGTTTAGTGAGGGACTCAAGGAGGCCGAAGCCCGGTGGAGACCAAACGCTTGGTCAATTGCTAAAGAAGAAAGCAGGGGAAGGAGTTAGAGTGCTGATGCTTGTTTGGGATGACAGAACTTCAGTACCTGTGTTGAAACAGGATGGTCTGATGGCTACACATGATGAAGAGACTTCGACTTTCTTCTTGGATTCAGATGTGCATTGCGTGTTGTGTCCTCGTGATCCTGACAATGGAGGAAGCTTCATTCAGGATTTGCAGATATCCACCATGTTCACTCATCATCAGAAGATTGTTGTGGTGGACAGTGAATTACCATCTAGAAAGTCTGATAAAAGAAGAATCGTAAGTTTTGTTGGTGGCCTTGATCTTTGTGATGGAAGATATGATTCTCCATTCCATTCACTTTTCAGGACACTTGACACTGCACATAACAATGATTTCCACCAGCCTAATTTTCCTGGGGCAGATATCAACAAAGGTGGTCCTAGGGAACCTTGGCATGACATCCACAGTCGGCTCGAAGGACCGATTGCCTGGGATGTCTTGTTCAATTTTGAGCAGAGATGGAGAAAGCAAGGTGGTAAAGATTTGCTCCTTAAGATAAGAGATCTTGAGGATGTCATCATTCCACCATCCCCAGTAATGTTTCCAAATGACCCAGAAACTTGGAATGTTCAGTTATTTAGGTCTATTGACGGCGGAGCTGCTTTCGGTTTCCCTGACACGCCAGAAGATGCGGCAAGAGCTGGCCTTGTGAGTGGAAAAGATAACATCATTGATCGAAGCATTCAGGACGCTTACATTCACGCCATAAGGAGAGCAAAGAGTTTCATCTATATTGAGAATCAGTATTTCCTTGGCAGCAGCTTTGACTGGACCCCAGATGGTATCACGCCTGAGGAAATTGGCGCATTGCATCTGATACCAAAGGAGTTGTCACTAAAGATTTGCAGCAAGATTGCATCTGGAGAGAGGTTTACAGTGTATGCTGTGATCCCAATGTGGCCAGAGGGAGTTCCAGACTCTTCATCAGTTCAGGCTATATTGGACTGGCAGAGGAGAACAATGGAAATGATGTATACAGATATTGCAAATGCACTTAAAGTAAAGGGTATTCAGAGTGATCCTAGGAACTATTTGACATTCTTTTGCCTAGGAAACCGTGAGGCAAAGAAATCTCCAGAGTACGAGCCTAAAGACAAGCCAGATGCTGATACAGCTTATTCAAGAGCACAACAGTCTAGGCGATTCATGATATATGTTCATTCCAAGATGATGATCGTTGATGATGAGTACATTATTGTTGGATCTGCAAATATCAACCAAAGATCAATGGATGGCGCCAGGGACTCGGAGATAGCAATGGGAGCCTATCAACCAGGCCACTTAGCTAGCAGACAGCCTGCACGTGGACATATACATGGTTTTCGGATGGCATTGTGGTATGAACACCTCGGAATGCTTGACAATTGCTTCCTCCATCCTGAAAGTGAAGAGTGTATCAAAAAGGTTAACCAGATTTCTGACAAATATTGGGATCTATACTCAAGCGACAATGTCGAACGAGACCTTCCCGGCCACCTTCTTCGCTATCCCGTTGAAGTTTCCAGCGAAGGAAAGATCACACAGCTCGGACTGGAGTTCTTTCCTGACACAGAGGCTCGCATTCTTGGTGGCAAAGCTGACTTACTGCCTCCCATCCTCACTACATAG 2475 0.4408 MTISNNSFTLTSDDQVKMAKFLLHGTLHATVHEVDEIHGAGSGNFLTKMKENIEEHVGVGKGIPKMYATIDLDKARVGRTRTIQNEPSKPKWQESFHIYCAHMASNVIFTVKDANPIGATLIGRAYLPVLELMKGKEVDKWIEILNEDKEPVRGGSKIHVKLQYFEIRKDPNWGRGIGSGKYPGVPYTFFSQRQGCKVTLYQDAHVPEQFIPKIPLAGNNFYETHRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDSRRPKPGGDQTLGQLLKKKAGEGVRVLMLVWDDRTSVPVLKQDGLMATHDEETSTFFLDSDVHCVLCPRDPDNGGSFIQDLQISTMFTHHQKIVVVDSELPSRKSDKRRIVSFVGGLDLCDGRYDSPFHSLFRTLDTAHNNDFHQPNFPGADINKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLLKIRDLEDVIIPPSPVMFPNDPETWNVQLFRSIDGGAAFGFPDTPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKSFIYIENQYFLGSSFDWTPDGITPEEIGALHLIPKELSLKICSKIASGERFTVYAVIPMWPEGVPDSSSVQAILDWQRRTMEMMYTDIANALKVKGIQSDPRNYLTFFCLGNREAKKSPEYEPKDKPDADTAYSRAQQSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPGHLASRQPARGHIHGFRMALWYEHLGMLDNCFLHPESEECIKKVNQISDKYWDLYSSDNVERDLPGHLLRYPVEVSSEGKITQLGLEFFPDTEARILGGKADLLPPILTT* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02272 824 Gene3D C2 domain 13 168 IPR035892 -
Pte15g02272 824 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 23 166 IPR035892 -
Pte15g02272 824 Gene3D Endonuclease Chain A 215 458 - -
Pte15g02272 824 CDD C2_plant_PLD 19 165 - -
Pte15g02272 824 Pfam C2 domain 53 144 IPR000008 -
Pte15g02272 824 FunFam Phospholipase D delta 218 461 - -
Pte15g02272 824 PIRSF PLD_plant 12 824 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pte15g02272 824 SMART C2_3c 26 141 IPR000008 -
Pte15g02272 824 ProSiteProfiles C2 domain profile. 2 142 IPR000008 -
Pte15g02272 824 PANTHER PHOSPHOLIPASE D 21 812 IPR015679 -
Pte15g02272 824 SMART pld_4 343 381 IPR001736 GO:0003824
Pte15g02272 824 SMART pld_4 671 698 IPR001736 GO:0003824
Pte15g02272 824 SUPERFAMILY Phospholipase D/nuclease 169 462 - -
Pte15g02272 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 671 698 IPR001736 GO:0003824
Pte15g02272 824 Pfam Phospholipase D C terminal 743 813 IPR024632 -
Pte15g02272 824 Gene3D Endonuclease Chain A 499 718 - -
Pte15g02272 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 343 381 IPR001736 GO:0003824
Pte15g02272 824 SUPERFAMILY Phospholipase D/nuclease 465 755 - -
Pte15g02272 824 Pfam Phospholipase D Active site motif 672 698 IPR001736 GO:0003824
Pte15g02272 824 Pfam Phospholipase D Active site motif 343 381 IPR001736 GO:0003824
Pte15g02272 824 FunFam Phospholipase D 484 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02272 Pte-Chr15 32704802 32708789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02272 18 825 Phospholipase D Gene Family (Wang group) AT3G15730 76.695 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02272 K01115 - rcu:8282326 1382.85