Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02238 ATGGCTGACAACAAAGGCATTAGCTTAGAGGAAATCAAGAAGGAAAATGTTGATCTTGAGCATATGCCACTTAATGAAGTATTTGAGCAATTGCAATGTTCGAAAGAAGGTCTGAGTAGTGACGAAGGTCGGAAAAGACTGCAAATTTTTGGTCCAAATAAGCTAGAAGAGAAGGAGGCAATTCCAAATCGTGTTATGAAACAGGAAAGCAAGGTTCTAAAGTTCTTTGGCTTTATGTGGAATCCTCTATCATGGGTGATGGAGTTAGCAGCCATCATGGCCATTGCTTTGGCAAATGGAGGGGGTAAGGGACCAGATTGGCAGGATTTTGTTGGCATAGTGGCATTGCTCATCATCAACTCCACCATAAGCTTTATAGAGGAAAACAATGCAGGCAATGCTGCTGCAGCACTTATGGCTGGTCTGGCTCCAAAGACCAAGGTTCTAAGAGATGGAAGATGGTGTGAACAAGAAGCTGCTATACTGGTGCCTGGAGATATCATAAGCATCAAGCTAGGAGATATTATTCCAGCTGACGCTCGTCTTCTAGAAGGCGATCCTCTCAAAATTGACCAGTCCTCGCTTACAGGTGAGTCGTTACCTGTCACAAGGTACTCGGGAGACGAAGTCTTTTCTGGCTCCACAGTTAAACAAGGGGAGCTTGAGGCTGTTGTGATTGCCACTGGAGTTCATACTTTCTTCGGTAAAGCTGCTCACTTGGTAGACAGCACCAATCAAGAAGGACATTTCCAAAAGGTGCTGACTGCAATTGGTAACTTCTGCATTTGCTCAATCGCTGTAGGCATGATTGTAGAGATTGTAGTAATGTATCCGATTCAACACCGCAAGTATAGGGACGGAATTGATAATCTCTTGGTGCTTCTCATTGGAGGGATCCCAATTGCCATGCCAACGGTTTTGTCTGTAACAATGGCTATAGGTTCCCATCGCTTGTCGCAGCAAGGTGCTATTACAAAAAGGATGACAGCCATCGAGGAGATGGCTGGAATGGATGTTCTATGCAGTGACAAAACAGGCACTCTCACATTGAATAAGCTTACTGTAGACAAGAACCTGATTGAGGTTTTTGCAAAGGATGTGGAGAAAGACATGGTTATTTTGCTTGGAGCTAGGGCTTCCAGAGTTGAGAACCAAGATGCTATTGATGCTTGCATCGTTGGAATGCTTGGTGACCCTAGGGAGGCAAGAGAAGGTATCAATGAGGTACACTTCTTGCCTTTCAATCCTGTGGAAAAACGCACAGCAATAACATACATCGACTCTGAAGGCAACTGGCACAGAGTTAGCAAAGGTGCTCCAGAGCAGATAATAGAACTCTGCAATCTTCGTGAAGACGTAAAACTGAAAGTTCATGCCATTATTGACAAGTTTGCTGATCGCGGTTTGCGTTCACTTGCCGTAGCAAGACAAACTGTGCCAGAAAAATCTAAAGATAGTCCAGGATCACCATGGCAATTTGTTGGACTCTTGCCCCTCTTCGATCCTCCTAGGCATGACAGTGCTGAAACCATTAGCCGAGCCCTTCACCTTGGAGTGAATGTGAAGATGATAACTGGTGACCAACTTGCTATTGGGAAGGAGACTGGTCGAAGACTCGGTATGGGAACAAACATGTATCCTTCATCCTCTCTTCTTGGCCAGCACAAGGATGAGAACATCGCCGCTCTTCCAGTTGATGAGCTCATCGAGAAAGCTGATGGCTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATAGTGAAGAGATTGCAAGAGAGGAAACACATATGTGGAATGACAGGAGATGGTGTGAACGATGCTCCCGCATTGAAGAGGGCAGACATAGGAATTGCAGTTGCGGATGCAACCGATGCAGCGAGGGGTGCATCTGATATAGTCCTCACAGAGCCAGGATTAAGTGTGATAGTGAGTGCCGTTTTGACAAGTAGATCCATTTTCCAAAGAATGAAGAATTACACCATCTACGCTGTTTCTATAACCATCCGTATTGTCCTGGGATTTCTTCTGCTAGCTCTTATATGGAAGTTTGATTTCTCTCCGTTCATGGTTTTGATCATTGCCATACTCAATGATGGAACCATTATGACCATTTCTAAGGACAGAGTGAAGCCATCACCTACCCCAGATTCGTGGAAATTAAAGGAGATATTTGCGACTGGCGTTGTGCTTGGAACTTACCTAGCTGTCATGACAGTTGTCTTCTTTTGGGGTGCTCATACATCAGACTTCTTCTCTGACAAGTTTGGCGTTAGATCCATTAGGAACAACCTTCCTCAGCTTACTTCAGCTGTGTATCTTCAAGTGAGTATTATCAGTCAGGCTCTCATCTTTGTCACAAGGTCAAGGAGTTGGTCTTTAATTGAACGCCCTGGTCTGTTGCTTGTTACTGCATTTTTTGTGGCACAGTTGATTGCCACCATTATTGCTGTCTACGCTAAATGGGGCTTTGCAAGGATACATGGGATTGGATGGGGTTGGGCAGGTGTCATTTGGCTCTACACCATTGTTTTCTACATTCCATTAGATATTCTCAAGTTCGTCATTCGTTATGCCTTAACCGGCAAGGCCTGGGATAACATCCTCCAGAACAAGACTGCGTTCACAACAAAGAAAGATTATGGGAAAGGAGAAAGAGAGGCACAGTGGGCAACAGCTCAACGCACTCTACATGGGCTTAACCCTCCTGAATCTGATCCCCTGAAAGACAAGAATTATAGGGAATTGTCTGAAATTGCAGAGCAAGCCAAGAAGCGCGCTGAAGTTGCAAGGTTGAGGGAGCTTCATACACTAAAGGGGCATGTGGAGTCAGTGGTGAAACTCAAAGGACTTGACATAGACACCATTCAACAGCACTACACTGTCTAA 2886 0.4487 MADNKGISLEEIKKENVDLEHMPLNEVFEQLQCSKEGLSSDEGRKRLQIFGPNKLEEKEAIPNRVMKQESKVLKFFGFMWNPLSWVMELAAIMAIALANGGGKGPDWQDFVGIVALLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWCEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSSLTGESLPVTRYSGDEVFSGSTVKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIGNFCICSIAVGMIVEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKDVEKDMVILLGARASRVENQDAIDACIVGMLGDPREAREGINEVHFLPFNPVEKRTAITYIDSEGNWHRVSKGAPEQIIELCNLREDVKLKVHAIIDKFADRGLRSLAVARQTVPEKSKDSPGSPWQFVGLLPLFDPPRHDSAETISRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQHKDENIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRSIFQRMKNYTIYAVSITIRIVLGFLLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYLAVMTVVFFWGAHTSDFFSDKFGVRSIRNNLPQLTSAVYLQVSIISQALIFVTRSRSWSLIERPGLLLVTAFFVAQLIATIIAVYAKWGFARIHGIGWGWAGVIWLYTIVFYIPLDILKFVIRYALTGKAWDNILQNKTAFTTKKDYGKGEREAQWATAQRTLHGLNPPESDPLKDKNYRELSEIAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02238 961 Gene3D - 338 637 IPR023214 -
Pte15g02238 961 ProSitePatterns E1-E2 ATPases phosphorylation site. 343 349 IPR018303 -
Pte15g02238 961 Gene3D - 910 961 - -
Pte15g02238 961 FunFam Plasma membrane ATPase 493 648 - -
Pte15g02238 961 NCBIfam plasma-membrane proton-efflux P-type ATPase 37 818 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte15g02238 961 PANTHER CALCIUM-TRANSPORTING ATPASE 22 895 - -
Pte15g02238 961 SFLD C1.7: P-type atpase like 323 651 - -
Pte15g02238 961 FunFam Plasma membrane ATPase 144 228 - -
Pte15g02238 961 SUPERFAMILY Calcium ATPase, transduction domain A 144 241 IPR008250 -
Pte15g02238 961 Pfam E1-E2 ATPase 143 320 - -
Pte15g02238 961 NCBIfam HAD-IC family P-type ATPase 575 686 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g02238 961 NCBIfam HAD-IC family P-type ATPase 113 360 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g02238 961 CDD P-type_ATPase_H 37 853 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte15g02238 961 FunFam ATPase 4 plasma membrane-type 585 827 - -
Pte15g02238 961 Gene3D - 106 827 - -
Pte15g02238 961 PRINTS H+-transporting ATPase (proton pump) signature 772 793 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g02238 961 PRINTS H+-transporting ATPase (proton pump) signature 457 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g02238 961 PRINTS H+-transporting ATPase (proton pump) signature 572 588 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g02238 961 PRINTS H+-transporting ATPase (proton pump) signature 600 616 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g02238 961 PRINTS H+-transporting ATPase (proton pump) signature 631 656 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte15g02238 961 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 858 IPR023298 -
Pte15g02238 961 PRINTS P-type cation-transporting ATPase superfamily signature 341 355 - -
Pte15g02238 961 PRINTS P-type cation-transporting ATPase superfamily signature 495 506 - -
Pte15g02238 961 PRINTS P-type cation-transporting ATPase superfamily signature 600 619 - -
Pte15g02238 961 PRINTS P-type cation-transporting ATPase superfamily signature 191 205 - -
Pte15g02238 961 PRINTS P-type cation-transporting ATPase superfamily signature 517 527 - -
Pte15g02238 961 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Pte15g02238 961 Gene3D - 353 500 IPR023299 GO:0000166
Pte15g02238 961 SFLD p-type atpase 323 651 IPR044492 -
Pte15g02238 961 FunFam Plasma membrane ATPase 353 500 - -
Pte15g02238 961 Pfam haloacid dehalogenase-like hydrolase 337 614 - -
Pte15g02238 961 Coils Coil 912 932 - -
Pte15g02238 961 SUPERFAMILY HAD-like 337 647 IPR036412 -
Pte15g02238 961 Gene3D - 144 228 - -
Pte15g02238 961 Pfam Cation transporter/ATPase, N-terminus 21 93 IPR004014 -
Pte15g02238 961 SMART Cation_ATPase_N_a_2 18 99 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02238 Pte-Chr15 32323458 32327900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02238 8 962 Primary Pumps ATPases AT3G42640 82.932 0.0 1613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02238 K01535 - zju:107408630 1667.51