Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02235 ATGGCAGCCCAGGAAAAGGAAATCCAACCATCAAAAAACCAAAGGAAGAAGCATCCACACGAACCAGCTTCTCTTACTGCTTTTTTGAATCTAAGCCCTCCGAGTAAAGATTCAGAAGATGAATCCTCCAAGCCAGAACTGAAAAATCTCATCGACTGCTTCGTCGATACGAATCCGTCAAGGAACTCTTTGGAGTCTATTCAAGGTAGTAATGAAATGGAGCCTCGTATATTCTCATGCAACTATTGCCAACGAAAGTTTTATAGTTCACAGGCGCTTGGAGGACACCAGAATGCACACAAGCGTGAAAGAACTCTAGTGAAAAGATCAGGACACAAACTTGGCGCTACAGCCTCTATGGATTTGAGTCATGGATGCTTAAGCATGTCTTCTTTGCCTTTGCATGGCTTATACAACCGAGCGCTTGGTATTCAAGTGCACTCTCTGATTACCAAACCTTCTTATCAAACGTCAATCATTGGCTCAACTCGTCAGCATGACCTCCATGGACGGTGGAGTCACCCTATTGATTCACAAGCAGCAATTGGAAAGCTCACTTCCAAAAACTTTCAAGTTGAAATAGAAAAAGGATCATCAACCACAGGTGTGGTGCCAAGATTCAATGGTTTTATGCCAAGGTTCGATGGTTTTAGAAAAAAAATTTCAGTGACCGAGGGGATTGGAGGGTACTGGTTGAGCAGTGCTAGCCATTTGAAGTCCAAGAAAGATGAGATGCAGAAACTTGATTTATCCCTCAAACTGTAG 765 0.4301 MAAQEKEIQPSKNQRKKHPHEPASLTAFLNLSPPSKDSEDESSKPELKNLIDCFVDTNPSRNSLESIQGSNEMEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLVKRSGHKLGATASMDLSHGCLSMSSLPLHGLYNRALGIQVHSLITKPSYQTSIIGSTRQHDLHGRWSHPIDSQAAIGKLTSKNFQVEIEKGSSTTGVVPRFNGFMPRFDGFRKKISVTEGIGGYWLSSASHLKSKKDEMQKLDLSLKL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02235 254 Gene3D Classic Zinc Finger 57 124 - -
Pte15g02235 254 MobiDBLite consensus disorder prediction 1 45 - -
Pte15g02235 254 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Pte15g02235 254 SUPERFAMILY beta-beta-alpha zinc fingers 75 105 IPR036236 -
Pte15g02235 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Pte15g02235 254 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 5 254 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02235 Pte-Chr15 32303734 32304565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02235 23 255 C2H2 Transcription Factor Family AT5G25160 41.833 1.01e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte15g02235 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02235 - - qsa:O6P43_017957 271.552