Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02232 ATGCCAACTGACACTTTATCAAGTTCCGTCCAAACTGTATGTGTCACTGGCGCGGCTGGCTTCATAGCCTCTTGGATTGTTAAACTGCTCTTGGAAAAAGGCTACGCTGTTAGAGGGACTGTCAGGAATCCAGATGATCCTAATAACAACCATTTGAGAAAGCTAGATGGAGCTAAAGAGAGGTTAACGCTGTGGAAAGCCGATCTTCTTGATTTTCAATCTCTCAAAACTGCCATCGATGGCTGTAGTGGTGTTTTCCATCCTGCATCTCCTATTACCGACAATCCTGAACAAATGGTAGAGCCAGCTGTTATTGGGACCAGGAATGTGATTGTTGCTGCTGCAGAAGCCAAAGTTAGACGTGTGGTTTTCACTTCATCAATTGGTGCAGTTAACATGCATCCCAATAGGAGTCCAGATGAGGTCGTAGATGAGTCTTGTTGGAGCGATCTCGAGTACTGCGAGAAGACTAAGAACTGGTACTGCTATGCAAAGACTGTGGCTGAGCAATCAGCATGGGATTTGGCAAAGGAGAAGGGGGTAGATTTGGTTGTGGTGAATCCAGCTCTGATTCTTGGACCAATGCTGCAACCCAAATTGAATGCTAGCACTCATCATGTTATCAAGTATATGACAGGCTCTGCCAAGACATATGTCAATCACACTCAAGCTTATGCGCATGTGAAAGATGTTGCTTTAGCTCACATACTAGTTTTTGAGACTCCTTCTGCATCAGGTCGGTACCTTTGTGCTGAAACTGTGCTGCACCGCGCAGAGGTGGTCGAGATTCTTACCAAGTATTTTCCAGAATATCCAATCCCCACTAGATGTTCTGATGAAAAAAATCCAAGAGCTAAACCCTTTAAATTCTCAAACCAAAAGCTGAAGGATCTGGGTCTTGAATTTACTCCAACTTGGCAATGTCTATATGAAACTGTGAAGTGCCTCCAGGAGAGAGGGATCCTTCCCCTTCCTAATCAGCTGCAGCAACAAAATTCTCTTCATATAAAGTAA 1014 0.4418 MPTDTLSSSVQTVCVTGAAGFIASWIVKLLLEKGYAVRGTVRNPDDPNNNHLRKLDGAKERLTLWKADLLDFQSLKTAIDGCSGVFHPASPITDNPEQMVEPAVIGTRNVIVAAAEAKVRRVVFTSSIGAVNMHPNRSPDEVVDESCWSDLEYCEKTKNWYCYAKTVAEQSAWDLAKEKGVDLVVVNPALILGPMLQPKLNASTHHVIKYMTGSAKTYVNHTQAYAHVKDVALAHILVFETPSASGRYLCAETVLHRAEVVEILTKYFPEYPIPTRCSDEKNPRAKPFKFSNQKLKDLGLEFTPTWQCLYETVKCLQERGILPLPNQLQQQNSLHIK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02232 337 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Pte15g02232 337 CDD FR_SDR_e 13 300 - -
Pte15g02232 337 Gene3D - 4 337 - -
Pte15g02232 337 FunFam Cinnamoyl-CoA reductase 1 4 335 - -
Pte15g02232 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 313 - -
Pte15g02232 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 317 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02232 Pte-Chr15 32262339 32265575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02232 11 276 Monolignol Biosynthesis Gene Families AT1G80820 70.301 2.96e-134 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02232 K09753 - qsa:O6P43_027941 544.273