Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02230 ATGGATTACTCATCAGCATGGTTAAACACTTCATTGGATCTTAATCATAACCCTCTCAGAATTCTTGATACAGCTTCTAAGGAGGAGGAAGAAAACAATTTCTTCGAGTTCGGAAGGAAGCCGTGTATTAAACAAGAGGCTGGAGCATTAATGGAGGAACTAAACCGGGTTAATGCAGAAAACAAAAGGTTGACTGAAATGTTAACTGAGATGTGTGAAAACTACAATGCTTTGCGAAACCGTTTGATGGATCATATGAGAAAGAACCCTGAAAAGGAGTTGAGCTCATCAAAGAAAAGAAAGTCAGAAAGCAGCAATAACAATAGCAATACACCTGCAATCAATAGAAACTCAGAGAGCAGTTCAACTGATGAAGAATCTTATAAGAAACGAAGGGATGAAAGCACTAAGGCTAAAATTATGAGAGTAAATGTCAGGACAGAAGCATCAGATACAAGCCTTGTTGTGAAAGATGGATATCAATGGAGGAAGTATGGTCAGAAGGTGACAAGAGACAATCCTTGTCCCAGGGCGTATTTCAAATGCTCTTTCGCTCCAAGCTGTCCAGTCAAAAAGAAGGTACAAAGAAGCTTGGAAGACCAATCTGTTTTGGTTGCAACCTATGAAGGAGAGCACAACCATCCCAAGACCTCTCAGCAGCTGCAAGCAACATCAGCATCCAGAAATAGTCTGCCACTTAGTTCAGTGGCAGGTACTGCGCTTCTCAGCTCCACTGGGCCTACAATCACCCTTGACTTGACAAAATCTAAGTCCAGTAGCGATGGAAAGAATCCAAAATCCAAGCGTGAAGCACCGCAAGTGCATCAGTTTTTGGTGGAGCAAATGGCTACATCCTTGACTAAGGATCCAAAATTTACAGCAGCACTAGCTGCGGCAATATCAGGAAAATTCTTGAAGAAGAATCCTACAGAAATGTGA 939 0.4175 MDYSSAWLNTSLDLNHNPLRILDTASKEEEENNFFEFGRKPCIKQEAGALMEELNRVNAENKRLTEMLTEMCENYNALRNRLMDHMRKNPEKELSSSKKRKSESSNNNSNTPAINRNSESSSTDEESYKKRRDESTKAKIMRVNVRTEASDTSLVVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSLEDQSVLVATYEGEHNHPKTSQQLQATSASRNSLPLSSVAGTALLSSTGPTITLDLTKSKSSSDGKNPKSKREAPQVHQFLVEQMATSLTKDPKFTAALAAAISGKFLKKNPTEM* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02230 312 Gene3D WRKY domain 140 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte15g02230 312 MobiDBLite consensus disorder prediction 89 135 - -
Pte15g02230 312 ProSiteProfiles WRKY domain profile. 151 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte15g02230 312 MobiDBLite consensus disorder prediction 251 276 - -
Pte15g02230 312 Coils Coil 47 81 - -
Pte15g02230 312 SMART WRKY_cls 156 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte15g02230 312 Pfam WRKY DNA -binding domain 157 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte15g02230 312 MobiDBLite consensus disorder prediction 101 121 - -
Pte15g02230 312 SUPERFAMILY WRKY DNA-binding domain 153 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte15g02230 312 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 44 304 IPR044810 GO:0003700
Pte15g02230 312 FunFam WRKY transcription factor 40 141 218 - -
Pte15g02230 312 MobiDBLite consensus disorder prediction 212 229 - -
Pte15g02230 312 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02230 Pte-Chr15 32239975 32242449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02230 1 311 WRKY Transcription Factor Family AT1G80840 52.308 1.31e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte15g02230 WRKY 3.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02230 - - qsa:O6P43_017941 407.912