Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02218 ATGGTGAAGAAATCACAGAAGAAGAATACTTCAAGCAGCGACACCAGCTGCAGCAACTTCGACAAGACACCAGAAACAGTCACCAAGACCAGGACACGGAAAAACACTCCACGACACTCACCACGACAACGTAGCTCAATCTACCGCGGTGTCACAAGACATCGTTGGACTGGTAGATATGAGGCTCATTTGTGGGACAAAGATTGCTGGAATGAATCGCAGAGCAAGAGAGGAAGACAGGGTAAACCTGTTGGGGTTGTAGGGGCGTACAGTGATGAAGCAGCGGCAGCTCATGCATATGACTTGGCAGCATTGAAGTACTGGGGCCAATCCACCATCCTTAATTTTCCGTTATCTACATACGAAGAGGAGCTTAAAGAAATGGGATATCAGTCTAAGGAGGAGTACATTGGATCCTTAAGAAGGCACCATCACAATGGAAGATGGGAAGCTCGAATTGGAAGAGTTTTTGGCAACAAATACGTTTACCTTGGAACATACGCTACTCAAGAAGAAGCAGCCATAGCATATGACAAAGCGGCCATAGAGTATCGAGGGGTCAATGCTGTGACGAACTTTGACCTTAGCCGATACATGGAATGGCTACATCCTAAGAACCAAGACAACCCCATGAACCCCAACGTTGAAAAACCAAACCCTAATGGTGACACTGACACTTGTTCATTTGCAAAACCAAATCGTGAGGTTGAAGTAGGATTTGATTCCCACCAATCAAGCTCAGAAATCAACAATGACTTGTTGGATCCAGCTAGGTCCTCATCTGCGTTAGGGCTTCTCATACAATCCCCAAAGTTCAAAAGAATGTTAGAAAGGACTTCAGGTTTAGTTGACCATCCTCCTAAAATGAAAGACTCCGATGACTCCCCACGTCGAACTACTTTCCCTGATGACATTCAAACATTTTTTGGTTGTCATGACTCAACCTGCTACACCCAAAATGATCATGACAATATTTTTAGTGCTTTCAACTCTTTTGAGGACCCAGTCTTTGATTGTGAGCTGAAGTCCAATATAGAGGAAAGCGTAGTGATATATCAGATGCACAACCAATCCTGGTAG 1080 0.4444 MVKKSQKKNTSSSDTSCSNFDKTPETVTKTRTRKNTPRHSPRQRSSIYRGVTRHRWTGRYEAHLWDKDCWNESQSKRGRQGKPVGVVGAYSDEAAAAHAYDLAALKYWGQSTILNFPLSTYEEELKEMGYQSKEEYIGSLRRHHHNGRWEARIGRVFGNKYVYLGTYATQEEAAIAYDKAAIEYRGVNAVTNFDLSRYMEWLHPKNQDNPMNPNVEKPNPNGDTDTCSFAKPNREVEVGFDSHQSSSEINNDLLDPARSSSALGLLIQSPKFKRMLERTSGLVDHPPKMKDSDDSPRRTTFPDDIQTFFGCHDSTCYTQNDHDNIFSAFNSFEDPVFDCELKSNIEESVVIYQMHNQSW* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02218 359 CDD AP2 142 196 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 ProSiteProfiles AP2/ERF domain profile. 47 117 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 MobiDBLite consensus disorder prediction 1 49 - -
Pte15g02218 359 SUPERFAMILY DNA-binding domain 136 196 IPR016177 GO:0003677
Pte15g02218 359 PRINTS Ethylene responsive element binding protein signature 176 196 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 SMART rav1_2 142 200 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 SMART rav1_2 47 123 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 ProSiteProfiles AP2/ERF domain profile. 135 194 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 Pfam AP2 domain 141 186 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 Pfam AP2 domain 47 109 IPR001471 GO:0003700|GO:0006355
Pte15g02218 359 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 221 - -
Pte15g02218 359 MobiDBLite consensus disorder prediction 1 25 - -
Pte15g02218 359 Gene3D AP2/ERF domain 135 196 IPR036955 GO:0003700|GO:0006355
Pte15g02218 359 Gene3D AP2/ERF domain 47 119 IPR036955 GO:0003700|GO:0006355
Pte15g02218 359 SUPERFAMILY DNA-binding domain 46 119 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02218 Pte-Chr15 32076787 32079797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02218 43 198 AP2-EREBP Transcription Factor Family AT5G57390 60.116 9.47e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte15g02218 AP2 1.7e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02218 K09285 - pop:18097139 404.831