Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02210 ATGAAAGAGAAAGACACACACATTGAAAAGAAGAATTTTCCGATCGGGTCTGAGCATTATGAACTCTATGAGGAGATCGGCCAGGGTGTGAGTGCTGTTGTACATCGTGCTTTTTGTAAGGAGCTCAATGAGCATGTTGCCATTAAAATTTTGGACTGTGATCGTGACAATTGTGACTTGAATAACATCTCACGTGAATCACAGACCATGATGTTGGTTGATCATCCTAATGTCCTTAAATCATATTGTTCATTTGTTAGTGATCAAAATTTGTGGGTCGTCATGCCATTTATGGCTGGAGGGTCTTGTCTCCATATATTGAAAGCTGCGTATTCAAATGGTTTTGAGGAGATTATAATAGCCACAATATTGAAAGAGGTGTTGAAGGGTTTAGATTATCTTCATCAGCATGGACATATACACAGAGATGTCAAAGCAGGGAATATTCTTATTGATGCACGTGGAAATATCAAACTTGGAGATTTTGGTGTTTCTGCTTGTCTTTTTGATTCAGGTGACAGGCAAAGGATGAGGAATACATTCGTTGGCACACCTTGTTGGATGGCACCAGAGGTTATGGAGCAATTACGTGGTTATGATTGCAAAGCTGATATATGGTCGTTTGGTATAACTGCTTTGGAGCTTGCTCACGGTCATGCTCCATTCTCAAAGTATCCCCCTATGAAGGTGTTACTTATGACTTTGCAAAATGCACCACCTGGCCTTGATTATGAAAGGGACAGGAAGTTCTCTAAGTCTTTTAAACAAATGATTGCTAGTTGCTTAGTGAAAGATCCTTCAAAACGGCCCTCTGCAAGAAAATTACTGAAGCATTCATTTTTCAAACAAGCTCGATCAAATGACTATATTGCAAGGTCACTTTTAGAGGGGTTGCCTGCTCTAGGTGACCGCATGAAGGCCTTAAAGAGAAAAGAAGAAGACATGCTTGCACAAAAGAAGATGCCTGATGGACAGAAGGAGGAGCTGTCGCAGAATGAATACAAAAGAGGAATAAGTGGTTGGAATTTCAATCTTGATGATATGAAGGCTCAAGCTTCCCTGATCCAGGACTTTGATGACGCTGGGAATGACAGCCTAATGGATGATTACAACGAGGTGCAAAATCGATCGTTCTCGGTTCCATCATTTTCTAGGATGAGAAGCGAAAAATCCGACGATGATTCTAGCCTGACTAGTTCGAGCTGTGAACATTATGTTTCACAAACTCCTTCTCCCCATTTTGAGAGTCACTCTGAGAATAATTTTGGTGAGAAGTCAGATTCAGAGAATGGTGCTAGGTATATGGAGAATACAGCTGCTTACCATCAAAAAGGGCTTTCATCAGGAATCTTACCTGAAATTGTTATTCCGCCAACTAGAGGAGAGAGTGAAAAATCACCAAAGCAACCGAATGCTCCAAGTACTGCAGCAACAGCTCAACAGCCAGGAGATGCAAATTCTGATGAAACTGATGAGAAAACAAAGGCACCTGTTGTTCAACAGAAGGGACGATTTAAGGTTACTTCTGAGAATGTTGACCTGGAAAAGGTGGCCCCATCTACTGGACTGCAGAAGAGTCAGAGCTTGCAGGTTATCACTTCCCAAACTGCACTTTCGAGTCCGTTAGGTTTGCCAATACCATCATCTGATGCTATGCCATCAAATGTTTCTGGCTGCTCGATTTTCACAGCATTGCATGCTATTTTGCAGACAAATATGGTTGAAAGGGAGCACATCTTGAGTTTAATGAAGCAATTTGCTTCAGGTGAAGCTGCAGCTAATTGCGCTGCTGATGGAACTTATGGACCAGGGAGGATTGCTGCATTGGAGAAATCCTTGCTTGAGGAAGCTCATGACAGGGAAAAGGAGTTACTTGATGAGATGACAGAGTTGCGATGGAGGCTCATCCGTGCCCAGGATGAGATCCAAAAACTAAAGACAGACAATACTCAGGTCTAA 1959 0.4201 MKEKDTHIEKKNFPIGSEHYELYEEIGQGVSAVVHRAFCKELNEHVAIKILDCDRDNCDLNNISRESQTMMLVDHPNVLKSYCSFVSDQNLWVVMPFMAGGSCLHILKAAYSNGFEEIIIATILKEVLKGLDYLHQHGHIHRDVKAGNILIDARGNIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQLRGYDCKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSARKLLKHSFFKQARSNDYIARSLLEGLPALGDRMKALKRKEEDMLAQKKMPDGQKEELSQNEYKRGISGWNFNLDDMKAQASLIQDFDDAGNDSLMDDYNEVQNRSFSVPSFSRMRSEKSDDDSSLTSSSCEHYVSQTPSPHFESHSENNFGEKSDSENGARYMENTAAYHQKGLSSGILPEIVIPPTRGESEKSPKQPNAPSTAATAQQPGDANSDETDEKTKAPVVQQKGRFKVTSENVDLEKVAPSTGLQKSQSLQVITSQTALSSPLGLPIPSSDAMPSNVSGCSIFTALHAILQTNMVEREHILSLMKQFASGEAAANCAADGTYGPGRIAALEKSLLEEAHDREKELLDEMTELRWRLIRAQDEIQKLKTDNTQV* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02210 652 CDD STKc_OSR1_SPAK 18 281 - -
Pte15g02210 652 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
Pte15g02210 652 MobiDBLite consensus disorder prediction 398 417 - -
Pte15g02210 652 ProSiteProfiles Protein kinase domain profile. 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g02210 652 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 647 IPR047173 GO:0043539
Pte15g02210 652 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pte15g02210 652 MobiDBLite consensus disorder prediction 464 485 - -
Pte15g02210 652 MobiDBLite consensus disorder prediction 381 429 - -
Pte15g02210 652 Coils Coil 611 648 - -
Pte15g02210 652 SMART serkin_6 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g02210 652 Pfam Protein kinase domain 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g02210 652 MobiDBLite consensus disorder prediction 457 504 - -
Pte15g02210 652 SUPERFAMILY Protein kinase-like (PK-like) 18 282 IPR011009 -
Pte15g02210 652 FunFam serine/threonine-protein kinase BLUS1 isoform X1 101 334 - -
Pte15g02210 652 FunFam Serine/threonine-protein kinase BLUS1 9 97 - -
Pte15g02210 652 Gene3D Transferase(Phosphotransferase) domain 1 101 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02210 Pte-Chr15 32003265 32014375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02210 8 634 MAP Kinase Kinase Kinase Kinase AT1G79640 61.194 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pte15g02210 Pkinase 7.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02210 K08835 - jre:108985864 876.7