Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02207 ATGGAATCTGGTTCTCAAGATGATTCCAAGGCTACAACATCAACATCATTGCCTGTACCTGCACCATCATCACCAGCATATCAAGACATGCTTGTGTACAATTTCCTCAACAACCTCTCCCCTTTAGAATTAGACAAGGGGATGTCAAACACCTCACCTACGTTTGCATCACCTCTTATCCATCTGGAGCCAGACGATCTTCTCATAAGATTGGAGTCAGCAGTAGGCGTCGAGGTTGACGGAGATCACAGAGCTGATACGAACTTTCTGAAGGAAGATAACCCTGTGGGACTTTCAGATATTATATCTACGAGTTTCAACTCACAACAAGATAAGAGTTTAAACCCACAGCATGATCGCAACTTCATCAAGGAAATGGTTCTGGAAGATGACCCTGTAAAGCCATCAAACATAGTACAACAAAGACTGCCAAAGGTCTCACTGGATAAGAGTGAATCAGCATTGCCTACCAATTTCTCTGATTATGCATCTGAAAACTTCGACAATCACATGGGGAACGATGGCAAGGTTTTTCCATATTCAAGAATACAAAATCATGAACAATGTGCTGCCGAGTTGCAGTCGGTGGATCCTCAGCTTGGATATGGTGCCCACAGACGTCTCCAATTTGAAGCTGGTAGAAGTCAAAGTTCTTGGACTCAGACACACGAAATTAATGCACCAGTATACAATAGCCTGATGGCTCTGACCAATTTAAACGACATGGTGTCTCCTGGTTTTCATAGAACAAGATTCATCGGCTCCGAAACTGTGAATTCCGCCGACTTCTTTCAAGGCCAGGTTCCCAACAGTTTTGCCATATCTGCAAACAATTCCGTAGATTCTGTTGGTACAAAAGTTGACTTGCAAGAAGAGCTGTCCAAAGGGCCTATTAATTTGCACAACGCTGGAAAGGATGTGCAAATAGACGATGTGAGTCTGATGAGAAAACGAAAAAAATCAATTACAAACCAAGGCCAGGATTGCAAACACTGCAATTGCAAGCGGTCCAAATGCGTGAAACTTTATTGTGATTGCTTTTCTGCTGGGAAGCTTTGTTCTGATTCATGTGCATGCCAAAACTGCAACAATAAGCTTGACTGTGAAGATATAGTTCTTGATACCCGTCAGCTAATTCAAACTCGTAATCCAATAGCTTTTTCTCCAAAGGTTGTAAGGAACACAGTGCCTAAAGTTGGGGAACAAGAGAACTTTGCTGCTGTTTCCTCAGCCAGGCACAAAAAAGGGTGCAACTGCAAAAGGTCAAAGTGCTTGAAGAATTATTGCGAATGTTTTCAGTCTAAAGTTGGTTGCTTCTTTGGGTGCCGATGTGAGAATTGTCAAAATTCTTTTGGCATAAAGACAGAAAATGCTAGGTCGGAGAAACGGGAGAAGCTTCCTCATGAGAGGCCATATACTGCAGAGGGTATAACTGACGGCATGAACACTGTAAATGCCAATAAGTTCTTTACACGGAACGTACTTGCTGATATAAGTAATCTGTCGCCACTTTCACATTCTTGGGTTTGTCCAACTGCTTCTTCAAATTCCTCTATGTTGCGAGACTGGAGAGGGTATACCAGAGACCAGATACAAGTTCCCGTCACCCAGGTGCTTATGCTAGATGCTGCCTTTGGAAGGAGGCCTCCACTTGTCAGTCTTATGGGCAAGAATGACGAAAATTATCCACCTCATGCACCAAGTGAGATTATGACTCATATGCCCGGAGACAAAAACAATCCTTCAAAGGGTATCCCATTTGGTCCAGACGATGGGGATTGGTCGACTGCAACGTCATCGTTTGGCTTGAGAAGTTGCCACAAACTCATGCGGCCTCCCGTTTCTTCTCTTACTGCGCCTGTGAAACCTGAAGACAAGACCAACCAAAGCAGTAATGAAGATGAGAATATGAATGTGTAA 1920 0.4339 MESGSQDDSKATTSTSLPVPAPSSPAYQDMLVYNFLNNLSPLELDKGMSNTSPTFASPLIHLEPDDLLIRLESAVGVEVDGDHRADTNFLKEDNPVGLSDIISTSFNSQQDKSLNPQHDRNFIKEMVLEDDPVKPSNIVQQRLPKVSLDKSESALPTNFSDYASENFDNHMGNDGKVFPYSRIQNHEQCAAELQSVDPQLGYGAHRRLQFEAGRSQSSWTQTHEINAPVYNSLMALTNLNDMVSPGFHRTRFIGSETVNSADFFQGQVPNSFAISANNSVDSVGTKVDLQEELSKGPINLHNAGKDVQIDDVSLMRKRKKSITNQGQDCKHCNCKRSKCVKLYCDCFSAGKLCSDSCACQNCNNKLDCEDIVLDTRQLIQTRNPIAFSPKVVRNTVPKVGEQENFAAVSSARHKKGCNCKRSKCLKNYCECFQSKVGCFFGCRCENCQNSFGIKTENARSEKREKLPHERPYTAEGITDGMNTVNANKFFTRNVLADISNLSPLSHSWVCPTASSNSSMLRDWRGYTRDQIQVPVTQVLMLDAAFGRRPPLVSLMGKNDENYPPHAPSEIMTHMPGDKNNPSKGIPFGPDDGDWSTATSSFGLRSCHKLMRPPVSSLTAPVKPEDKTNQSSNEDENMNV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02207 639 SMART CXC_2 327 368 IPR033467 -
Pte15g02207 639 SMART CXC_2 412 453 IPR033467 -
Pte15g02207 639 MobiDBLite consensus disorder prediction 575 599 - -
Pte15g02207 639 MobiDBLite consensus disorder prediction 621 639 - -
Pte15g02207 639 MobiDBLite consensus disorder prediction 1 22 - -
Pte15g02207 639 ProSiteProfiles CRC domain profile. 328 452 IPR005172 -
Pte15g02207 639 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 299 637 IPR044522 GO:0003700
Pte15g02207 639 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 330 365 IPR005172 -
Pte15g02207 639 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 414 450 IPR005172 -
Pte15g02207 639 MobiDBLite consensus disorder prediction 612 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02207 Pte-Chr15 31916614 31921496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02207 307 454 CPP Transcription Factor Family AT3G22760 53.289 6.38e-47 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte15g02207 TCR 3.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02207 K21776 - qsa:O6P43_027846 263.462