Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02191 ATGGTAGTTGCAGCTGAAGTCCTAGGGAGAACAACAACTAAAAGGAAGAAGTACATTGGAGTTTGCCAAAGGCCCTCAAGTAGATGGGTGGCTGAGATAAAGGATACAATACACAACATAAGAGTGTGGCTTGGCACATATGACACTGCTGAAGATGCTGCAAGGGCTTATGATGTAGTAGCATGCATGCTTCGTGGAACCAATACTCACACCAATTTCTCATCCAGGATAGAGGCCTCTAACTTTGCTGCTCCTTCATCTTCTTTCAATGTTATTCTTCATGAGCAAGAAACGGTAGAAGACCCCTCGTTTGATACTAGTAGTTATCTGAAACTGTACCTGCATGAAGATGGTGTCATTCATGAGAATTATGACGCTGCTAGTAATAATAGTCCTGGTGAAATGAAAGTGAGTGGTAGCACGGAAGTTCTACTGTCCAAATGTATTAATTTAAGGACTGATCATCAAGCGTTTGAGATAATGCAGGAAATGGTAGCAATAGAGGAGGATAATTCTGGGGAGAAGACATCAATAGTTAACGAACCTGTTAAGATGATGAAGTTTGATCGCAAATTCTCTACTTCACTGTATGCCTTCAATGGGGTTTTGATATGA 615 0.4098 MVVAAEVLGRTTTKRKKYIGVCQRPSSRWVAEIKDTIHNIRVWLGTYDTAEDAARAYDVVACMLRGTNTHTNFSSRIEASNFAAPSSSFNVILHEQETVEDPSFDTSSYLKLYLHEDGVIHENYDAASNNSPGEMKVSGSTEVLLSKCINLRTDHQAFEIMQEMVAIEEDNSGEKTSIVNEPVKMMKFDRKFSTSLYAFNGVLI* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02191 204 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 14 122 - -
Pte15g02191 204 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Pte15g02191 204 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Pte15g02191 204 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Pte15g02191 204 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Pte15g02191 204 FunFam ethylene-responsive transcription factor RAP2-11 16 75 - -
Pte15g02191 204 Gene3D AP2/ERF domain 16 76 IPR036955 GO:0003700|GO:0006355
Pte15g02191 204 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Pte15g02191 204 CDD AP2 16 73 IPR001471 GO:0003700|GO:0006355
Pte15g02191 204 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02191 Pte-Chr15 31602940 31603767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02191 10 77 AP2-EREBP Transcription Factor Family AT5G19790 58.824 2.14e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte15g02191 AP2 6.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02191 K09286 - qsa:O6P43_025506 138.658