Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02190 ATGAAGACAGAAAATATCATCACTTCTACCGCTGCAGTACCTACTGGTCGATTGACTAGGGCTAGAACTGCTGCTTCTCGTGCAAATGGTCAGTTTCCCCCTTTGAAGGGGCCTGTAAAACCAAATTTGAAGCACCCTACAGGAGAAAACAACAAGAAACCAACTTTGGATAATGTTTGTCTTCAACGTAAGAGGAGAGCAGCTTTTCAAGATGTAACCAATATCTTTTGTGAACCATCATATAAAACCTGTTTCAATGCTACCAAAATTCAGGCTAAGAAAAGCAAGACGGTAAGAGAACGCCAGGTTCATATATCTGAAGTAGTTCCCCTTGCTGGTGAACTGCCTTGTTTCCATACTGATGCAAAACCAAATATGTCTGAGGATATTTTGAGGAAAGAGTTAAAATTAAGGGGCGCTGTATTGGGTGATAATGCACAGCTTCGACAAAGTTTCAATGACAAGCGAAGTGCAAATGATAATTTGTCTGTATGCCAGAACATTGGAGTTACTTTTGGGTCAACTCCTCTTTGCGAGGTGGGGGAAGTTGGCTGCTCTGGAGTTGTATCTGCATCCAAAAATCCAGACATTATTGATATTGATGCTGATCAAGATGATCCTCAACTATGTGGTAATTATGCACCTGATATATACAACCATTTCCGTGCTACTGAGCTGTCTTGTAGGCCAAATCCTCATTTTATTGAAACAATTCAGCGAGACTTCACTGAAAGCATGCGGGAGATGCTTGTTGACTGGCTGGTGGAGGTTTCAGAGGATTACAAGTTGGTTCCAGATACTCTTTACCGTACTATATATCTCATTGATTGGTATCTCTCTCAAAATTACATTGAAAGACGGCATCTTCAGCTGCTTGGTATCACTTGCATGCTAATTTCTTCCAAGTATGAAGAGATTTGTGCCCCACGGGTTGAAGAATTTTGTTTCGTCACAGACAACACTTACACAAAGGAAGAGGTACTGAAGATGGAACGCGATGTACTTAAGTACCTTGGATTTCAGTTGTTTGTGCCAACTGCAAAGACTTTCCTGAGGAGGTTTCTCCGAGCTGCACAAGCTTCCTACAAATCACCTTCCCTTGAGTTGGAGTACATGGCCAATTATCTAGCTGAATTAACACTGATGGATTATGCATTCTTGAAATTCATTCCTTCAATCGTTGCTGCATCAGCTGTATTTCTGGCCAGATGGACAATAGACCAGTCGATACACCCATGGAATTCAACTCTTGAACATTATGCCTGGTACAAGGCATCAGACTTGAAAGTCTCTCTACTTGCATTACAAGAGTTACAGTTGAAAGCAAATGGCTGTCCTCTTGGTGCCGTTCGCATGAAGTACAGTCAAGAAAAGTTTAAACGCGTTGCAACATTGACTTCATCAAAGCTGATTGATACATTGTTCTGA 1428 0.4139 MKTENIITSTAAVPTGRLTRARTAASRANGQFPPLKGPVKPNLKHPTGENNKKPTLDNVCLQRKRRAAFQDVTNIFCEPSYKTCFNATKIQAKKSKTVRERQVHISEVVPLAGELPCFHTDAKPNMSEDILRKELKLRGAVLGDNAQLRQSFNDKRSANDNLSVCQNIGVTFGSTPLCEVGEVGCSGVVSASKNPDIIDIDADQDDPQLCGNYAPDIYNHFRATELSCRPNPHFIETIQRDFTESMREMLVDWLVEVSEDYKLVPDTLYRTIYLIDWYLSQNYIERRHLQLLGITCMLISSKYEEICAPRVEEFCFVTDNTYTKEEVLKMERDVLKYLGFQLFVPTAKTFLRRFLRAAQASYKSPSLELEYMANYLAELTLMDYAFLKFIPSIVAASAVFLARWTIDQSIHPWNSTLEHYAWYKASDLKVSLLALQELQLKANGCPLGAVRMKYSQEKFKRVATLTSSKLIDTLF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02190 475 SUPERFAMILY Cyclin-like 344 468 IPR036915 -
Pte15g02190 475 FunFam Mitotic cyclin 6 230 330 - -
Pte15g02190 475 Pfam Cyclin, C-terminal domain 345 467 IPR004367 -
Pte15g02190 475 CDD CYCLIN_AtCycA-like_rpt2 345 459 - -
Pte15g02190 475 SMART cyclin_7 252 336 IPR013763 -
Pte15g02190 475 SMART cyclin_7 349 437 IPR013763 -
Pte15g02190 475 PANTHER CYCLINS 160 456 IPR039361 -
Pte15g02190 475 SUPERFAMILY Cyclin-like 205 342 IPR036915 -
Pte15g02190 475 SMART Cyclin_C_2 345 468 IPR004367 -
Pte15g02190 475 MobiDBLite consensus disorder prediction 28 55 - -
Pte15g02190 475 Gene3D - 216 464 - -
Pte15g02190 475 Pfam Cyclin, N-terminal domain 216 342 IPR006671 -
Pte15g02190 475 Gene3D - 230 343 - -
Pte15g02190 475 FunFam Cyclin A1 333 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02190 Pte-Chr15 31595492 31602474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02190 1 475 Core Cell Cycle Gene Families AT1G80370 49.064 7.18e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02190 K06627 - tcc:18595851 522.702