Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02189 ATGCTAGCGGTGTCACCTTTGAGGAACCAAGATGAGAGCCAAAGCCCGATGGAGACCTTTTCAATTCGGCCAGAAGACTTCATTGACTTCTCAGATGGAAATATACTGGAAAGTATTAACTTTGATGACATTTTCTTGGATATCAACGATGGGGATCCGTTGCCTGATCTCGAGATGGACCCTGAAATCTTTGCCGATTTTTCCTCTTGTGGTGGTGGTGAGGAATCGGACATAATCTCCTACGTATCACTGGAAAAGTTTGAGGAAGAGAATACTGCGACTACTGGTCCTGCTGCTGATGCATGCAGGAACAAAGACGACTATGAAGTTAAAGCTTCTTCACCAGCTTCTGCAAGCTCTAGCGGCTTGAATTCTGTGTCAAGCAGAGGAGAGGAGCTTATGAGCAGGAGAGATGAATCTACCGGGGTGAAGCTATCCCAAAAGGAAACTGATAGAGGAAAGATATCATCAAAACAATCAAAGAATTCTCAAGGGAAACGAAAAGTAAAGGTGGATTGGACCCCAGAATTACATAGGAGGTTTGTGCAAGCTGTGGAGCAACTGGGTGTGGATAAGGCAGTGCCTTCTAGGATCTTAGAGATTATGGGTATCGATTGTCTCACCCGCCACAACATAGCAAGCCACCTTCAAGTATAA 657 0.449 MLAVSPLRNQDESQSPMETFSIRPEDFIDFSDGNILESINFDDIFLDINDGDPLPDLEMDPEIFADFSSCGGGEESDIISYVSLEKFEEENTATTGPAADACRNKDDYEVKASSPASASSSGLNSVSSRGEELMSRRDESTGVKLSQKETDRGKISSKQSKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQV* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02189 218 Gene3D - 165 218 - -
Pte15g02189 218 MobiDBLite consensus disorder prediction 1 21 - -
Pte15g02189 218 MobiDBLite consensus disorder prediction 113 130 - -
Pte15g02189 218 Pfam Myb-like DNA-binding domain 171 217 IPR001005 -
Pte15g02189 218 SUPERFAMILY Homeodomain-like 166 217 IPR009057 -
Pte15g02189 218 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 217 IPR044825 GO:0003700|GO:0045893
Pte15g02189 218 MobiDBLite consensus disorder prediction 107 170 - -
Pte15g02189 218 FunFam Two-component response regulator 164 218 - -
Pte15g02189 218 NCBIfam myb-like DNA-binding domain, SHAQKYF class 168 218 IPR006447 GO:0003677
Pte15g02189 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 218 IPR017930 -
Pte15g02189 218 MobiDBLite consensus disorder prediction 131 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02189 Pte-Chr15 31568802 31569592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02189 29 217 G2-like Transcription Factor Family AT5G44190 40.526 5.82e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte15g02189 Myb_DNA-binding 7.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02189 - - jre:109001455 237.269