Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02179 ATGGCTGAGACCGAGGATGATTCAAGATATTCTCCCGATACTTATGGTGCTCAGCACCATCAGGGTCATAGACTTGCGCATCATCAGAGACATTCACTCAGGAGTGCTCCATATTTCCAGCCAGTTGGAAATCAATTTATTAAAGAGGAGGATTATGAATTTGAAGAAGATGAGGAAGCTTTCCAAGAGGAAGATGATGGTAATGATCAAAACTACCATCTGTCCGAGAAGGGGGTTGATCACAATCTTGACGAGGATGGAGATGCTGATATTCAAGATGAAGATGATGACAACGGGCAGAAAAATGATCCTGTTAAGTCAGAGGAGATGGACATAGAAAGCCGTACAAAAAAGAGGAGGTTGAAGACTTTGAGTTCAAACTGCGAAATTGTTCCCCATATTTCAGTGCAATCGGTAGCACCCCCTTCAGTTCCTAAATCATCTTTTGGTGGTAGGAATTCCCTTACAGATTGGAGTGAACACGAAACATTTGCTCTTCTTGATGCTTGGGGTGATCGGTTTCTTCAGCATGGAAGGAAGAGTCTGCGATCAGAGGAATGGCAAGAGGTAGCAGAGAAGGTATCAGAAGTCTCTGAGTTTGAAAGAACAGATACCCAGTGCAGGAATCGTATTGATACATTAAAGAAGAAATACAAAAAGGAGAAGCTTAAATTTTCAGAAGTGACGGGTGAGACTAGTAAGTGGGTTTATTTCAAGAAAATGGATAAATTGCTGTCATCACTCTCACAGCGAGCTAGTCTCTCATGTGGTTTAGATCCTGTAGAATATGTATTCATGACTCCTAAAATCCCATTTAGCTGTGCAAATGGGTTAGATGCAATGCAGGGTACTCCTGAGAATTCAGGGTCCACAGGCTTTCAGGATGATTCAGATGAACTTCCACCAAAGAAAAGGAGGTATGGGAGGGATAAGTATGAGGGATCTTCTTTTAGGTTGATTGCAAATTCCATTCTGAAGTTCAGTGAGATATATGAGAAAATTGAGAACAGTAAAAGGCAGCAACTGATGGAATTAGAGAAGATGAGGATGGATTTCTTTAGGGAATTAGAAATGCAAAGGAGACAGATTTTAAAGAGAGCCCAAGCTGAGATTGCCAAAATAAGGCTGGCAAATGATGTGGAGAATGATGATTCTGCAGAGACTGCCAATGGGTAA 1176 0.4141 MAETEDDSRYSPDTYGAQHHQGHRLAHHQRHSLRSAPYFQPVGNQFIKEEDYEFEEDEEAFQEEDDGNDQNYHLSEKGVDHNLDEDGDADIQDEDDDNGQKNDPVKSEEMDIESRTKKRRLKTLSSNCEIVPHISVQSVAPPSVPKSSFGGRNSLTDWSEHETFALLDAWGDRFLQHGRKSLRSEEWQEVAEKVSEVSEFERTDTQCRNRIDTLKKKYKKEKLKFSEVTGETSKWVYFKKMDKLLSSLSQRASLSCGLDPVEYVFMTPKIPFSCANGLDAMQGTPENSGSTGFQDDSDELPPKKRRYGRDKYEGSSFRLIANSILKFSEIYEKIENSKRQQLMELEKMRMDFFRELEMQRRQILKRAQAEIAKIRLANDVENDDSAETANG* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02179 391 Gene3D - 158 220 - -
Pte15g02179 391 MobiDBLite consensus disorder prediction 281 309 - -
Pte15g02179 391 MobiDBLite consensus disorder prediction 98 119 - -
Pte15g02179 391 Coils Coil 331 351 - -
Pte15g02179 391 MobiDBLite consensus disorder prediction 66 85 - -
Pte15g02179 391 ProSiteProfiles Myb-like domain profile. 158 215 IPR001005 -
Pte15g02179 391 MobiDBLite consensus disorder prediction 281 295 - -
Pte15g02179 391 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 141 376 IPR044823 -
Pte15g02179 391 MobiDBLite consensus disorder prediction 50 65 - -
Pte15g02179 391 MobiDBLite consensus disorder prediction 1 119 - -
Pte15g02179 391 Coils Coil 364 384 - -
Pte15g02179 391 FunFam trihelix transcription factor ASIL2 158 220 - -
Pte15g02179 391 Pfam Myb/SANT-like DNA-binding domain 157 244 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02179 Pte-Chr15 31443359 31446445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02179 295 375 Trihelix Transcription Factor Family AT3G14180 38.889 3.13e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte15g02179 Myb_DNA-bind_4 5.4e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02179 - - zju:107405054 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g02179 15 31443359 31446445 Pte15g02179 15 31443359 31446445 RCT