Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02178 ATGAGTGTTGTTGGCTTTGATTTTGGCAATGAGAGCTGCCTAGTGGCTGTTGCAAGACAGAGGGGGATCGATGTTGTACTCAATGATGAGTCCAAGCGTGAAACTCCTGCTATTGTTTGCTTTGGTGACAAGCAGAGATTCATTGGAACAGCTGGTGCTGCTTCCTCCATGATGAACCCCAAGAACTCCATCTCTCAGATAAAACGACTGATTGGTAGGCAGTTCAATGATCCAGAACTGCAGAGAGATCTCAAATCATTTCCTTTTTCTGTTACTGAGGGGCCTGACGGATTTCCTTTGATTCATGCACGTTACTTGGGGGAAATAAGAACATTTACACCTACTCAGGTGCTCGGAATGTTGCTGTCAAATCTCAAAGGGATAGCAGAGAAAAACTTGAATGCAGCAGTGGTGGATTGCTGCATAGGCATTCCAGTGTATTTTACGGATCTGCAGAGAAGGGCTGTCATAGATGCTGCAACTATTGCTGGCTTACACCCACTTCGTCTGATACATGAGACAACTGCCACTGCCCTAGCTTATGGTATTTACAAGACTGACCTACCTGAGAATGAACAGCTGAATGTTGCTTTCGTGGACATCGGGCATGCGAGCATGCAAGTATGCATTGCCGGGTTCAAGAAGGGCCAATTGAAAATTTTATCTCACGCATTTGACAGGTCTCTTGGTGGAAGAGACTTTGATGAAGTTCTATTCCAGCACTTTGCTGCAAATTTCAAGGAACAGTACAAAATTGACGTTCTCCAGAATGCCAGGGCTTGTATAAGGCTGAGGGCTGCATGTGAAAAGCTGAAGAAGGTGCTCAGTGCCAATCCGGGGGCACCTTTGAATATTGAGTGCTTAATGGATGAGAAGGATGTAAGTGGATTTATGAAGCGTGATGAGTTTGAACAGATCAGTGTACCCATTTTGGAGCGGGTCAAAAAGCCTTTGGAGAAGGCTCTGGCAGAAGCTGGTCTTACAGTTGAGAATATTCACATGGTAGAAGTGGTTGGTTCAGCATCTCGCATCCCTGCTATAGTTAAGATTTTAACTGAATTCTTCAAAAAGGAGCCTAGGCGAACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCCTTGGAGTGTGCGATACTTAGCCCAACATTTAAAGTTAGGGAGTTTCAGGTTAATGAGAGCTTCCCTTTCTCAATTTCTTTGTCCTGGAAAGGTTCAGCTCCAGAGGCCCAGAATGATGCATCTGATAATGTTCATAGTACTGTTGTTTTCCCAAAGGGAAACCCACTTCCCAGCATTAAGGCATTGACATTCTACAGGCCAGGTACATTCTCTGTTGATGTGCAATATTCAGACGTGAATGAGTTGCAGACATCTGCAAAGATCAGTAGCTACACTATAGGACCATTCCAATCTACAAAAGGAGATAAAGCAAAAGTGAAGGTGAAAGTTCGTCTGAACATTCATGGGATTGTGGCGGTTGAATCCGCAACTCTGATGGAAGAGGAAGGAGTTGATGTTTCCGTTACGAAAGAGCCAGAAGGAGATAGTACAAAGATGGACACTGATGAATCTTCTGTAGCTGTTCCTGATAATACTTATCCTCCGAACTCAAATGAAAATGATGTGAACATGCAAGATGCAAAGGGACCTGTTGTTAACACGGTGGCTGAAAATGGTGTATCTGATTCTGTAGACAAGCCTACCGATACAAAGGCTGAAACTAACAAGAGAAAAGTGAAGAAAAGTAGCATACATGTCGCTGAGGTCGTCTATGGAGCACTTGCACATGCAGACCTGCAAAAGGCAGTAGAGAAGGAGTTTGAGATGGCACTTCAAGATCGAGTGATGGAGGAAACTAAAGACAAGAAAAATGCCGTCGAGACATATGTCTATGACATGCGAAATAAGCTTAGTGACAAATTTCAAGAGTTCGTTACTGATTCAGAGAGGGAGGAGCTTATGGCTAAACTTCAGGAGGTGGAAGATTGGCTGTATGAAGATGGTGAGGATGAGACAAAAGGTGTCTACATTGCCAAGCTCGAGGAGCTTACAAAGCAAGGTTATCCCATTGAAGAGCGTTACAAGGAATATATGGAGAGGGGTTCAGTGGTAGATCAGCTCGGGTATTGCATTAAAAGTTACAGGGAAGCAGCAATGTCAAATGATCCCAAATTTGATCACATTGATATCACTGAAAAACAAAAGGTTCTGAATGAATGTGTTGAAGCGGAGGCCTGGATTAGGGAGAAAAGGCAGCAGCAGGACTCTCTTCCAAAATATTCGAATCCAGTCCTTCTATCAGCTGATGTGAGAAGGAAAGCTGAGGCGCTTGATAGGTTCTGCAAACCAATTATGATGAAACCTAGACCAGCCAAGCCAGCAGCTCCAGAAACACCCCCAGCTACTCCACCTCAGGGAGGGGAGCAGCAGCAACCCCAGGGACAGGAAACCAATCCCAATGCCCACTCTTGTGCTGGTGAGAAGACCAGGGAAGGTAATGGCGAGGTATCACCAGCTTCAGAAGAACCAATGGACACTGACAAGGGAGAAACTACGAGCACCGGTTGA 2571 0.4485 MSVVGFDFGNESCLVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASSMMNPKNSISQIKRLIGRQFNDPELQRDLKSFPFSVTEGPDGFPLIHARYLGEIRTFTPTQVLGMLLSNLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLIHETTATALAYGIYKTDLPENEQLNVAFVDIGHASMQVCIAGFKKGQLKILSHAFDRSLGGRDFDEVLFQHFAANFKEQYKIDVLQNARACIRLRAACEKLKKVLSANPGAPLNIECLMDEKDVSGFMKRDEFEQISVPILERVKKPLEKALAEAGLTVENIHMVEVVGSASRIPAIVKILTEFFKKEPRRTMNASECVARGCALECAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNDASDNVHSTVVFPKGNPLPSIKALTFYRPGTFSVDVQYSDVNELQTSAKISSYTIGPFQSTKGDKAKVKVKVRLNIHGIVAVESATLMEEEGVDVSVTKEPEGDSTKMDTDESSVAVPDNTYPPNSNENDVNMQDAKGPVVNTVAENGVSDSVDKPTDTKAETNKRKVKKSSIHVAEVVYGALAHADLQKAVEKEFEMALQDRVMEETKDKKNAVETYVYDMRNKLSDKFQEFVTDSEREELMAKLQEVEDWLYEDGEDETKGVYIAKLEELTKQGYPIEERYKEYMERGSVVDQLGYCIKSYREAAMSNDPKFDHIDITEKQKVLNECVEAEAWIREKRQQQDSLPKYSNPVLLSADVRRKAEALDRFCKPIMMKPRPAKPAAPETPPATPPQGGEQQQPQGQETNPNAHSCAGEKTREGNGEVSPASEEPMDTDKGETTSTG* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02178 856 FunFam Heat shock 70 kDa protein 4 38 113 - -
Pte15g02178 856 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Pte15g02178 856 Gene3D - 38 113 - -
Pte15g02178 856 MobiDBLite consensus disorder prediction 790 807 - -
Pte15g02178 856 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 628 IPR029047 -
Pte15g02178 856 Gene3D - 595 704 IPR029048 -
Pte15g02178 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 708 794 IPR029048 -
Pte15g02178 856 FunFam Heat shock 70 kDa protein 4 595 705 - -
Pte15g02178 856 FunFam Heat shock 70 kDa protein 4 230 313 - -
Pte15g02178 856 MobiDBLite consensus disorder prediction 808 825 - -
Pte15g02178 856 MobiDBLite consensus disorder prediction 782 856 - -
Pte15g02178 856 MobiDBLite consensus disorder prediction 522 544 - -
Pte15g02178 856 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
Pte15g02178 856 CDD HSPA4_like_NDB 2 381 - -
Pte15g02178 856 MobiDBLite consensus disorder prediction 510 544 - -
Pte15g02178 856 FunFam Heat shock 70 kDa protein 4 112 204 - -
Pte15g02178 856 Gene3D - 5 374 - -
Pte15g02178 856 PANTHER HSC70CB, ISOFORM G-RELATED 1 847 - -
Pte15g02178 856 Gene3D Actin; Chain A, domain 4 230 313 - -
Pte15g02178 856 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pte15g02178 856 PRINTS 70kDa heat shock protein signature 332 348 - -
Pte15g02178 856 PRINTS 70kDa heat shock protein signature 363 383 - -
Pte15g02178 856 PRINTS 70kDa heat shock protein signature 30 42 - -
Pte15g02178 856 PRINTS 70kDa heat shock protein signature 140 160 - -
Pte15g02178 856 PRINTS 70kDa heat shock protein signature 2 15 - -
Pte15g02178 856 FunFam Heat shock 70 kDa protein 4 1 77 - -
Pte15g02178 856 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 592 IPR029047 -
Pte15g02178 856 Gene3D - 186 360 - -
Pte15g02178 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 596 695 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02178 Pte-Chr15 31437208 31441066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02178 4 438 Calmodulin-binding Proteins AT1G16030 34.932 3.91e-84 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02178 K09489 - cave:132186282 1345.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g02178 15 31437208 31441066 Pte15g02178 15 31437208 31441066 RCT