Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02161 ATGGTAACCTACCCCTCCCACGAATCTGAATACACTAACTCTTTCTTTTGTATATCTGTGCCCCTTTGCATTGATTTTCAATATGCACACAGGGGAAGGGAACAGGAAGTTTCGTGGTTGGTTTCAATTCTTGTGGATGGAATATTGATATTGAATCCGTGGATTTGGTTAGATAACTGGAGTGTGAAGGCAATCCGCAGAAAAACTACTGGTACTGGTAGGATGAGATACTTGCGCCATTTGCCGAGGCGGTTCAAGAGTGGGTTTAGAGAAGGCACTCAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCTTCAGCTTAA 321 0.4486 MVTYPSHESEYTNSFFCISVPLCIDFQYAHRGREQEVSWLVSILVDGILILNPWIWLDNWSVKAIRRKTTGTGRMRYLRHLPRRFKSGFREGTQAAPRKKGAAASA* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02161 106 Gene3D - 55 98 IPR011331 GO:0003735|GO:0005840|GO:0006412
Pte15g02161 106 PANTHER 60S RIBOSOMAL PROTEIN L37 59 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02161 Pte-Chr15 30859982 30862421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02161 59 107 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 83.673 6.68e-24 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02161 K02922 - mnt:21408863 78.9517